Information for 1-GGTCTGTCAA (Motif 7)

A C T G A C T G A C G T A G T C A C G T A C T G A C G T A T G C C G T A C G T A
Reverse Opposite:
A C G T C G A T A T C G C G T A G T A C C G T A A C T G C G T A A G T C A G T C
p-value:1e-9
log p-value:-2.259e+01
Information Content per bp:1.907
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.61%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets55.3 +/- 19.9bp
Average Position of motif in Background45.4 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GGTCTGTCAA
--GCTGTCAA
 A C T G A C T G A C G T A G T C A C G T A C T G A C G T A T G C C G T A C G T A
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GGTCTGTCAA
--CCTGTCAA
 A C T G A C T G A C G T A G T C A C G T A C T G A C G T A T G C C G T A C G T A
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

PH0141.1_Pknox2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GGTCTGTCAA---
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C G T A T G C C G T A C G T A A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGTCTGTCAA
---NTGTCAN
 A C T G A C T G A C G T A G T C A C G T A C T G A C G T A T G C C G T A C G T A
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGTCTGTCAA--
TGTCTGDCACCT
 A C T G A C T G A C G T A G T C A C G T A C T G A C G T A T G C C G T A C G T A A C G T A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

PH0140.1_Pknox1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGTCTGTCAA---
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C G T A T G C C G T A C G T A A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0105.1_Meis3/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGTCTGTCAA---
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C G T A T G C C G T A C G T A A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0104.1_Meis2/Jaspar

Match Rank:8
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGTCTGTCAA---
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C G T A T G C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGTCTGTCAA
GGTCTGGCAT
 A C T G A C T G A C G T A G T C A C G T A C T G A C G T A T G C C G T A C G T A
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

PH0102.1_Meis1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GGTCTGTCAA---
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C A C G T A C T G A C G T A T G C C G T A C G T A A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C