Information for 5-TTCAGCACTGCCANAG (Motif 6)

A C G T A C G T A T G C G C T A T A C G G T A C C T G A A T G C C G A T C T A G A G T C A G T C C G T A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C C G A T A C T G A C T G A G T C C G T A A T C G A G C T A C T G A G T C C A G T T A C G G T C A G T C A
p-value:1e-10
log p-value:-2.359e+01
Information Content per bp:1.714
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif2.61%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets26.3 +/- 9.8bp
Average Position of motif in Background31.9 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:TTCAGCACTGCCANAG
--------TGCCAA--
 A C G T A C G T A T G C G C T A T A C G G T A C C T G A A T G C C G A T C T A G A G T C A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TTCAGCACTGCCANAG
------CGTGCCAAG-
 A C G T A C G T A T G C G C T A T A C G G T A C C T G A A T G C C G A T C T A G A G T C A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

Myb/MA0100.2/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TTCAGCACTGCCANAG
---CCAACTGCCA---
 A C G T A C G T A T G C G C T A T A C G G T A C C T G A A T G C C G A T C T A G A G T C A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.55
Offset:8
Orientation:reverse strand
Alignment:TTCAGCACTGCCANAG---
--------TGCCTGAGGCN
 A C G T A C G T A T G C G C T A T A C G G T A C C T G A A T G C C G A T C T A G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.55
Offset:8
Orientation:forward strand
Alignment:TTCAGCACTGCCANAG---
--------AGCCTCAGGCA
 A C G T A C G T A T G C G C T A T A C G G T A C C T G A A T G C C G A T C T A G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:TTCAGCACTGCCANAG-----
------ANTGCCTGAGGCAAN
 A C G T A C G T A T G C G C T A T A C G G T A C C T G A A T G C C G A T C T A G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.55
Offset:7
Orientation:forward strand
Alignment:TTCAGCACTGCCANAG
-------TTGCCAAG-
 A C G T A C G T A T G C G C T A T A C G G T A C C T G A A T G C C G A T C T A G A G T C A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

NFIA/MA0670.1/Jaspar

Match Rank:8
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TTCAGCACTGCCANAG
------GGTGCCAAGT
 A C G T A C G T A T G C G C T A T A C G G T A C C T G A A T G C C G A T C T A G A G T C A G T C C G T A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TTCAGCACTGCCANAG--
-------AAACCACAGAN
 A C G T A C G T A T G C G C T A T A C G G T A C C T G A A T G C C G A T C T A G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:TTCAGCACTGCCANAG-----
------ATTGCCTGAGGCAAT
 A C G T A C G T A T G C G C T A T A C G G T A C C T G A A T G C C G A T C T A G A G T C A G T C C G T A A C T G C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T