Information for 12-CCCCCGGGGGGAA (Motif 26)

A G T C A G T C A G T C A G T C A T G C A T C G A C T G A T C G C T A G C T A G T C A G C T G A C T G A
Reverse Opposite:
A G C T A G C T A G T C A G T C A G T C T A G C A G T C A T G C A T C G C T A G A C T G A C T G C T A G
p-value:1e-3
log p-value:-9.023e+00
Information Content per bp:1.750
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif45.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets35.5 +/- 20.5bp
Average Position of motif in Background59.4 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.85
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGGGGGGAA
CACCCCCGGGGGGG-
 A C G T A C G T A G T C A G T C A G T C A G T C A T G C A T C G A C T G A T C G C T A G C T A G T C A G C T G A C T G A
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CCCCCGGGGGGAA
ACCCCCCCGGGGGGN-
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A T G C A T C G A C T G A T C G C T A G C T A G T C A G C T G A C T G A
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G A C G T

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.84
Offset:-3
Orientation:reverse strand
Alignment:---CCCCCGGGGGGAA
NCCCCCCCGGGGGGN-
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A T G C A T C G A C T G A T C G C T A G C T A G T C A G C T G A C T G A
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGGGGGGAA
GTCCCCAGGGGA---
 A C G T A C G T A G T C A G T C A G T C A G T C A T G C A T C G A C T G A T C G C T A G C T A G T C A G C T G A C T G A
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:5
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CCCCCGGGGGGAA
AAATTCCCCCCGGAAGT-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A T G C A T C G A C T G A T C G C T A G C T A G T C A G C T G A C T G A
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CCCCCGGGGGGAA
ATTCCCTGAGGGGAA-
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A T G C A T C G A C T G A T C G C T A G C T A G T C A G C T G A C T G A
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGGGGGGAA
NGTCCCNNGGGA---
 A C G T A C G T A G T C A G T C A G T C A G T C A T G C A T C G A C T G A T C G C T A G C T A G T C A G C T G A C T G A
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCCCCGGGGGGAA
TGCCCTGAGGGCA--
 A C G T A C G T A G T C A G T C A G T C A G T C A T G C A T C G A C T G A T C G C T A G C T A G T C A G C T G A C T G A
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:9
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CCCCCGGGGGGAA
ATTGCCTGAGGCGAA-
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A T G C A T C G A C T G A T C G C T A G C T A G T C A G C T G A C T G A
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:10
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCCCCGGGGGGAA
TGCCCTNAGGGCA--
 A C G T A C G T A G T C A G T C A G T C A G T C A T G C A T C G A C T G A T C G C T A G C T A G T C A G C T G A C T G A
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T