Information for 11-GCCGGCAGGY (Motif 24)

A C T G A T G C G T A C A C T G A C T G A G T C C G T A A C T G A C T G A G C T
Reverse Opposite:
C T G A A G T C A G T C A C G T A C T G A G T C A G T C A C T G A T C G A G T C
p-value:1e-4
log p-value:-1.054e+01
Information Content per bp:1.906
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif62.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets31.0 +/- 24.9bp
Average Position of motif in Background50.2 +/- 38.1bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GCCGGCAGGY----
--SDGCAGGTGCNS
 A C T G A T G C G T A C A C T G A C T G A G T C C G T A A C T G A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

SNAI2/MA0745.1/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GCCGGCAGGY--
---AACAGGTGT
 A C T G A T G C G T A C A C T G A C T G A G T C C G T A A C T G A C T G A G C T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCCGGCAGGY---
---NNCAGGTGNN
 A C T G A T G C G T A C A C T G A C T G A G T C C G T A A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCCGGCAGGY--
-AAGGCAAGTGT
 A C T G A T G C G T A C A C T G A C T G A G T C C G T A A C T G A C T G A G C T A C G T A C G T
A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.63
Offset:4
Orientation:forward strand
Alignment:GCCGGCAGGY----
----VCAGGTRDRY
 A C T G A T G C G T A C A C T G A C T G A G T C C G T A A C T G A C T G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ID4/MA0824.1/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GCCGGCAGGY---
---GACAGGTGTN
 A C T G A T G C G T A C A C T G A C T G A G T C C G T A A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

TCF4/MA0830.1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCCGGCAGGY---
---NNCAGGTGCG
 A C T G A T G C G T A C A C T G A C T G A G T C C G T A A C T G A C T G A G C T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G

ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCCGGCAGGY
ANCCGGAAGT-
 A C G T A C T G A T G C G T A C A C T G A C T G A G T C C G T A A C T G A C T G A G C T
C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGCAGGY-
TGCCCNGGGGCA
 A C G T A C T G A T G C G T A C A C T G A C T G A G T C C G T A A C T G A C T G A G C T A C G T
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A

THAP1/MA0597.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCCGGCAGGY
TNNGGGCAG--
 A C G T A C T G A T G C G T A C A C T G A C T G A G T C C G T A A C T G A C T G A G C T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T