Information for 7-MATGHTACCA (Motif 17)

T G C A C G T A C G A T A C T G G T A C A C G T C T G A A G T C G T A C T G C A
Reverse Opposite:
A C G T A C T G C T A G A G C T G T C A C A T G A G T C G C T A C G A T A C G T
p-value:1e-5
log p-value:-1.218e+01
Information Content per bp:1.700
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.48%
Number of Background Sequences with motif169.9
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets60.9 +/- 32.0bp
Average Position of motif in Background50.1 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0161.1_Six1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---MATGHTACCA----
ANNNATGATACCCCATC
 A C G T A C G T A C G T T G C A C G T A C G A T A C T G G T A C A C G T C T G A A G T C G T A C T G C A A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

DMRT3/MA0610.1/Jaspar

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:MATGHTACCA-
NTTGATACATT
 T G C A C G T A C G A T A C T G G T A C A C G T C T G A A G T C G T A C T G C A A C G T
C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---MATGHTACCA----
AATNTTGATACCCTATN
 A C G T A C G T A C G T T G C A C G T A C G A T A C T G G T A C A C G T C T G A A G T C G T A C T G C A A C G T A C G T A C G T A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

PB0059.1_Six6_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---MATGHTACCA----
ANANNTGATACCCNATN
 A C G T A C G T A C G T T G C A C G T A C G A T A C T G G T A C A C G T C T G A A G T C G T A C T G C A A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---MATGHTACCA----
ATAAATGACACCTATCA
 A C G T A C G T A C G T T G C A C G T A C G A T A C T G G T A C A C G T C T G A A G T C G T A C T G C A A C G T A C G T A C G T A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

PH0165.1_Six6_1/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---MATGHTACCA----
ANANNTGATACCCTATN
 A C G T A C G T A C G T T G C A C G T A C G A T A C T G G T A C A C G T C T G A A G T C G T A C T G C A A C G T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T

PH0162.1_Six2/Jaspar

Match Rank:7
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---MATGHTACCA----
ANANGTGATACCCCATT
 A C G T A C G T A C G T T G C A C G T A C G A T A C T G G T A C A C G T C T G A A G T C G T A C T G C A A C G T A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

Six3/MA0631.1/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---MATGHTACCA----
ANANGTGATACCCTATN
 A C G T A C G T A C G T T G C A C G T A C G A T A C T G G T A C A C G T C T G A A G T C G T A C T G C A A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---MATGHTACCA----
ANANGTGATACCCTATN
 A C G T A C G T A C G T T G C A C G T A C G A T A C T G G T A C A C G T C T G A A G T C G T A C T G C A A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

USF2/MA0526.1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--MATGHTACCA
GTCATGTGACC-
 A C G T A C G T T G C A C G T A C G A T A C T G G T A C A C G T C T G A A G T C G T A C T G C A
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T