Information for 7-GTVACACTHCACVTHC (Motif 11)

A C T G A C G T T C G A C G T A A G T C G T C A A G T C A G C T G A T C G T A C G T C A A G T C T C A G A G C T G A T C G T A C
Reverse Opposite:
A C T G C A T G T C G A A G C T A C T G A C G T A C T G C A T G C T G A A C T G A C G T C T A G A C G T A C G T C G T A A G T C
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.716
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.74%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.5 +/- 26.8bp
Average Position of motif in Background59.5 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTVACACTHCACVTHC
KTTCACACCT-------
 A C G T A C T G A C G T T C G A C G T A A G T C G T C A A G T C A G C T G A T C G T A C G T C A A G T C T C A G A G C T G A T C G T A C
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GTVACACTHCACVTHC
-TCACACCT-------
 A C T G A C G T T C G A C G T A A G T C G T C A A G T C A G C T G A T C G T A C G T C A A G T C T C A G A G C T G A T C G T A C
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTVACACTHCACVTHC
-TCACACCT-------
 A C T G A C G T T C G A C G T A A G T C G T C A A G T C A G C T G A T C G T A C G T C A A G T C T C A G A G C T G A T C G T A C
A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTVACACTHCACVTHC
-TCACACCT-------
 A C T G A C G T T C G A C G T A A G T C G T C A A G T C A G C T G A T C G T A C G T C A A G T C T C A G A G C T G A T C G T A C
A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTVACACTHCACVTHC
-TCACACCT-------
 A C T G A C G T T C G A C G T A A G T C G T C A A G T C A G C T G A T C G T A C G T C A A G T C T C A G A G C T G A T C G T A C
A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GTVACACTHCACVTHC
TTTCACACCTN------
 A C G T A C T G A C G T T C G A C G T A A G T C G T C A A G T C A G C T G A T C G T A C G T C A A G T C T C A G A G C T G A T C G T A C
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GTVACACTHCACVTHC
-TCACACCT-------
 A C T G A C G T T C G A C G T A A G T C G T C A A G T C A G C T G A T C G T A C G T C A A G T C T C A G A G C T G A T C G T A C
A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTVACACTHCACVTHC
CNGTCACGCCAC------
 A C G T A C G T A C T G A C G T T C G A C G T A A G T C G T C A A G T C A G C T G A T C G T A C G T C A A G T C T C A G A G C T G A T C G T A C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GTVACACTHCACVTHC
-TGACACCT-------
 A C T G A C G T T C G A C G T A A G T C G T C A A G T C A G C T G A T C G T A C G T C A A G T C T C A G A G C T G A T C G T A C
A C G T G A C T T C A G C T G A A G T C C T G A T A G C G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----GTVACACTHCACVTHC
ATAAATGACACCTATCA---
 A C G T A C G T A C G T A C G T A C T G A C G T T C G A C G T A A G T C G T C A A G T C A G C T G A T C G T A C G T C A A G T C T C A G A G C T G A T C G T A C
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A A C G T A C G T A C G T