Information for 5-TGAAGACTGA (Motif 30)

C G A T A T C G G C T A C G T A T A C G C G T A T A G C A C G T C T A G T G C A
Reverse Opposite:
A C G T A G T C C G T A A T C G C G A T A T G C A C G T C G A T A T G C C G T A
p-value:1e-7
log p-value:-1.711e+01
Information Content per bp:1.827
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.80%
Number of Background Sequences with motif235.7
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets44.6 +/- 30.8bp
Average Position of motif in Background50.2 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGAAGACTGA
--NNNANTGA
 C G A T A T C G G C T A C G T A T A C G C G T A T A G C A C G T C T A G T G C A
A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGAAGACTGA
NGAAGC----
 C G A T A T C G G C T A C G T A T A C G C G T A T A G C A C G T C T A G T G C A
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TGAAGACTGA---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T C G A T A T C G G C T A C G T A T A C G C G T A T A G C A C G T C T A G T G C A A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TGAAGACTGA---
-GWAAYHTGABMC
 C G A T A T C G G C T A C G T A T A C G C G T A T A G C A C G T C T A G T G C A A C G T A C G T A C G T
A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGAAGACTGA
TGCTGACTCA
 C G A T A T C G G C T A C G T A T A C G C G T A T A G C A C G T C T A G T G C A
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGAAGACTGA
-BCAGACWA-
 C G A T A T C G G C T A C G T A T A C G C G T A T A G C A C G T C T A G T G C A
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TGAAGACTGA
-CCAGACAG-
 C G A T A T C G G C T A C G T A T A C G C G T A T A G C A C G T C T A G T G C A
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TGAAGACTGA-
-CCAGACRSVB
 C G A T A T C G G C T A C G T A T A C G C G T A T A G C A C G T C T A G T G C A A C G T
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-TGAAGACTGA
ATGAATATTC-
 A C G T C G A T A T C G G C T A C G T A T A C G C G T A T A G C A C G T C T A G T G C A
G C T A A G C T T A C G G T C A C T G A C G A T C T G A G C A T C A G T A G T C A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGAAGACTGA
TGCTGAGTCA
 C G A T A T C G G C T A C G T A T A C G C G T A T A G C A C G T C T A G T G C A
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A