Information for 9-AYCSTGWCCTTAS (Motif 19)

C G T A A G C T A G T C A T G C A C G T A C T G C G T A A G T C A G T C A C G T A C G T C T G A A T G C
Reverse Opposite:
A T C G A G C T T C G A C G T A A C T G A C T G C G A T A G T C C G T A A T C G A C T G C T G A A C G T
p-value:1e-9
log p-value:-2.155e+01
Information Content per bp:1.871
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.0 +/- 14.6bp
Average Position of motif in Background57.0 +/- 41.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:AYCSTGWCCTTAS
---GTGACCTT--
 C G T A A G C T A G T C A T G C A C G T A C T G C G T A A G T C A G T C A C G T A C G T C T G A A T G C
A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:2
Score:0.74
Offset:4
Orientation:reverse strand
Alignment:AYCSTGWCCTTAS
----TGACCTYA-
 C G T A A G C T A G T C A T G C A C G T A C T G C G T A A G T C A G T C A C G T A C G T C T G A A T G C
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:AYCSTGWCCTTAS
--BNTGDCCTTG-
 C G T A A G C T A G T C A T G C A C G T A C T G C G T A A G T C A G T C A C G T A C G T C T G A A T G C
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AYCSTGWCCTTAS
---NTGACCTTGA
 C G T A A G C T A G T C A T G C A C G T A C T G C G T A A G T C A G T C A C G T A C G T C T G A A T G C
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AYCSTGWCCTTAS
---CTGACCTTTG
 C G T A A G C T A G T C A T G C A C G T A C T G C G T A A G T C A G T C A C G T A C G T C T G A A T G C
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AYCSTGWCCTTAS---
NNNGTGACCTTTGNNN
 C G T A A G C T A G T C A T G C A C G T A C T G C G T A A G T C A G T C A C G T A C G T C T G A A T G C A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:AYCSTGWCCTTAS
----TGACCT---
 C G T A A G C T A G T C A T G C A C G T A C T G C G T A A G T C A G T C A C G T A C G T C T G A A T G C
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AYCSTGWCCTTAS---
NNNNTGACCTTTNNNN
 C G T A A G C T A G T C A T G C A C G T A C T G C G T A A G T C A G T C A C G T A C G T C T G A A T G C A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AYCSTGWCCTTAS
---ATGACCTTGA
 C G T A A G C T A G T C A T G C A C G T A C T G C G T A A G T C A G T C A C G T A C G T C T G A A T G C
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:10
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AYCSTGWCCTTAS-
----TGACCTTGAV
 C G T A A G C T A G T C A T G C A C G T A C T G C G T A A G T C A G T C A C G T A C G T C T G A A T G C A C G T
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A