Information for 8-WCAAGGTCCAAAH (Motif 18)

G C T A G A T C C T G A T C G A A C T G T C A G A C G T A G T C G T A C C G T A T C G A C G T A G A T C
Reverse Opposite:
C T A G G C A T A G C T A C G T A C T G C T A G T G C A A G T C G T A C A G C T A G C T C A T G C G A T
p-value:1e-9
log p-value:-2.235e+01
Information Content per bp:1.634
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif6.29%
Number of Background Sequences with motif873.9
Percentage of Background Sequences with motif1.80%
Average Position of motif in Targets47.4 +/- 24.3bp
Average Position of motif in Background50.0 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0134.1_Hnf4a_2/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--WCAAGGTCCAAAH-
GGCAAAAGTCCAATAA
 A C G T A C G T G C T A G A T C C T G A T C G A A C T G T C A G A C G T A G T C G T A C C G T A T C G A C G T A G A T C A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

ESRRB/MA0141.3/Jaspar

Match Rank:2
Score:0.72
Offset:0
Orientation:forward strand
Alignment:WCAAGGTCCAAAH
TCAAGGTCATA--
 G C T A G A T C C T G A T C G A A C T G T C A G A C G T A G T C G T A C C G T A T C G A C G T A G A T C
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:3
Score:0.70
Offset:0
Orientation:forward strand
Alignment:WCAAGGTCCAAAH
TCAAGGTCAT---
 G C T A G A T C C T G A T C G A A C T G T C A G A C G T A G T C G T A C C G T A T C G A C G T A G A T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:WCAAGGTCCAAAH
TCAAGGTCAN---
 G C T A G A T C C T G A T C G A A C T G T C A G A C G T A G T C G T A C C G T A T C G A C G T A G A T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---WCAAGGTCCAAAH-
TATTCAAGGTCATGCGA
 A C G T A C G T A C G T G C T A G A T C C T G A T C G A A C T G T C A G A C G T A G T C G T A C C G T A T C G A C G T A G A T C A C G T
C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.68
Offset:1
Orientation:forward strand
Alignment:WCAAGGTCCAAAH
-CAAGGHCANV--
 G C T A G A T C C T G A T C G A A C T G T C A G A C G T A G T C G T A C C G T A T C G A C G T A G A T C
A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-WCAAGGTCCAAAH
BTCAAGGTCA----
 A C G T G C T A G A T C C T G A T C G A A C T G T C A G A C G T A G T C G T A C C G T A T C G A C G T A G A T C
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-WCAAGGTCCAAAH
ATCAAGGTCA----
 A C G T G C T A G A T C C T G A T C G A A C T G T C A G A C G T A G T C G T A C C G T A T C G A C G T A G A T C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-WCAAGGTCCAAAH
NTCAAGGTCA----
 A C G T G C T A G A T C C T G A T C G A A C T G T C A G A C G T A G T C G T A C C G T A T C G A C G T A G A T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---WCAAGGTCCAAAH
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T G C T A G A T C C T G A T C G A A C T G T C A G A C G T A G T C G T A C C G T A T C G A C G T A G A T C
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G