Information for 12-AACCAGTCTGGCA (Motif 15)

T G C A C T G A G T A C G T A C C G T A T C A G A C G T A T G C C G A T A T C G C A T G T G A C C G T A
Reverse Opposite:
C G A T A C T G G T A C A T G C G C T A T A C G T G C A A G T C G C A T C A T G A C T G G A C T A C G T
p-value:1e-10
log p-value:-2.499e+01
Information Content per bp:1.660
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif3.14%
Number of Background Sequences with motif278.3
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets46.3 +/- 27.1bp
Average Position of motif in Background47.8 +/- 30.2bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.70
Offset:4
Orientation:forward strand
Alignment:AACCAGTCTGGCA-
----GGTCTGGCAT
 T G C A C T G A G T A C G T A C C G T A T C A G A C G T A T G C C G A T A T C G C A T G T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:AACCAGTCTGGCA---
----TGTCTGDCACCT
 T G C A C T G A G T A C G T A C C G T A T C A G A C G T A T G C C G A T A T C G C A T G T G A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:forward strand
Alignment:AACCAGTCTGGCA---
---CTGTCTGTCACCT
 T G C A C T G A G T A C G T A C C G T A T C A G A C G T A T G C C G A T A T C G C A T G T G A C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.65
Offset:3
Orientation:forward strand
Alignment:AACCAGTCTGGCA
---CTGTCTGG--
 T G C A C T G A G T A C G T A C C G T A T C A G A C G T A T G C C G A T A T C G C A T G T G A C C G T A
A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:AACCAGTCTGGCA
-VBSYGTCTGG--
 T G C A C T G A G T A C G T A C C G T A T C A G A C G T A T G C C G A T A T C G C A T G T G A C C G T A
A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACCAGTCTGGCA---
NNTNNTGTCTGGNNTNG
 A C G T T G C A C T G A G T A C G T A C C G T A T C A G A C G T A T G C C G A T A T C G C A T G T G A C C G T A A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:AACCAGTCTGGCA--
------NTTGGCANN
 T G C A C T G A G T A C G T A C C G T A T C A G A C G T A T G C C G A T A T C G C A T G T G A C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AACCAGTCTGGCA
-------TTGGCA
 T G C A C T G A G T A C G T A C C G T A T C A G A C G T A T G C C G A T A T C G C A T G T G A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AACCAGTCTGGCA
---TWGTCTGV--
 T G C A C T G A G T A C G T A C C G T A T C A G A C G T A T G C C G A T A T C G C A T G T G A C C G T A
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:AACCAGTCTGGCA-
------CTTGGCAA
 T G C A C T G A G T A C G T A C C G T A T C A G A C G T A T G C C G A T A T C G C A T G T G A C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A