Information for 7-HCAGCTCCATTGC (Motif 10)

G A C T A G T C C G T A A C T G A G T C A G C T A G T C A G T C C G T A A C G T A C G T C A T G A G T C
Reverse Opposite:
A C T G G T A C C G T A C G T A A C G T C T A G A C T G C T G A A C T G A G T C A C G T A C T G C G T A
p-value:1e-12
log p-value:-2.782e+01
Information Content per bp:1.887
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.09%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets60.0 +/- 21.7bp
Average Position of motif in Background37.4 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:forward strand
Alignment:HCAGCTCCATTGC
-GTCCGCCATTA-
 G A C T A G T C C G T A A C T G A G T C A G C T A G T C A G T C C G T A A C G T A C G T C A T G A G T C
A C G T C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:HCAGCTCCATTGC-----
-TGTTCCCATTGTGTACT
 G A C T A G T C C G T A A C T G A G T C A G C T A G T C A G T C C G T A A C G T A C G T C A T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C T A G C A G T A G C T A G T C G A T C G A T C C G T A G A C T C G A T C A T G C A G T T C A G G A C T C T G A A T G C G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:HCAGCTCCATTGC
-CAGCC-------
 G A C T A G T C C G T A A C T G A G T C A G C T A G T C A G T C C G T A A C G T A C G T C A T G A G T C
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:HCAGCTCCATTGC-
--GGCTCYAKCAYC
 G A C T A G T C C G T A A C T G A G T C A G C T A G T C A G T C C G T A A C G T A C G T C A T G A G T C A C G T
A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:HCAGCTCCATTGC
---GCTCCG----
 G A C T A G T C C G T A A C T G A G T C A G C T A G T C A G T C C G T A A C G T A C G T C A T G A G T C
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.54
Offset:6
Orientation:forward strand
Alignment:HCAGCTCCATTGC---
------CCATTGTTYB
 G A C T A G T C C G T A A C T G A G T C A G C T A G T C A G T C C G T A A C G T A C G T C A T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-HCAGCTCCATTGC
CACAGN--------
 A C G T G A C T A G T C C G T A A C T G A G T C A G C T A G T C A G T C C G T A A C G T A C G T C A T G A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:8
Score:0.53
Offset:6
Orientation:forward strand
Alignment:HCAGCTCCATTGC-
------CCTTTGTT
 G A C T A G T C C G T A A C T G A G T C A G C T A G T C A G T C C G T A A C G T A C G T C A T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:HCAGCTCCATTGC--
-----NCCATTGTTC
 G A C T A G T C C G T A A C T G A G T C A G C T A G T C A G T C C G T A A C G T A C G T C A T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.52
Offset:6
Orientation:forward strand
Alignment:HCAGCTCCATTGC--
------CCATTGTTC
 G A C T A G T C C G T A A C T G A G T C A G C T A G T C A G T C C G T A A C G T A C G T C A T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A T C G C T A C A G T C G A T T A C G C G A T G C A T G A T C