Information for 3-GAGGGGGGAGCCCTCG (Motif 4)

C T A G C G T A A C T G A T C G A C T G T A C G A C T G C T A G G T C A A T C G G T A C A T G C G T A C A G C T G T A C T A C G
Reverse Opposite:
A T G C A C T G C T G A A C T G A T C G A C T G A T G C A C G T A G T C A G T C A T G C T A G C A T G C A G T C C G A T A G T C
p-value:1e-12
log p-value:-2.804e+01
Information Content per bp:1.768
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.2 +/- 27.7bp
Average Position of motif in Background42.6 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGGGAGCCCTCG
RGKGGGCGGAGC-----
 A C G T C T A G C G T A A C T G A T C G A C T G T A C G A C T G C T A G G T C A A T C G G T A C A T G C G T A C A G C T G T A C T A C G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGGGGGGAGCCCTCG
NNVDGGGYGGGGCYN---
 A C G T A C G T C T A G C G T A A C T G A T C G A C T G T A C G A C T G C T A G G T C A A T C G G T A C A T G C G T A C A G C T G T A C T A C G
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GAGGGGGGAGCCCTCG
GGGGGCGGGGCC----
 C T A G C G T A A C T G A T C G A C T G T A C G A C T G C T A G G T C A A T C G G T A C A T G C G T A C A G C T G T A C T A C G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:GAGGGGGGAGCCCTCG
-----CGGAGC-----
 C T A G C G T A A C T G A T C G A C T G T A C G A C T G C T A G G T C A A T C G G T A C A T G C G T A C A G C T G T A C T A C G
A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GAGGGGGGAGCCCTCG
-GGGGNGGGGC-----
 C T A G C G T A A C T G A T C G A C T G T A C G A C T G C T A G G T C A A T C G G T A C A T G C G T A C A G C T G T A C T A C G
A C G T C T A G C T A G A C T G A C T G G A T C A C T G C A T G C T A G C T A G T G A C A C G T A C G T A C G T A C G T A C G T

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGGGGGGAGCCCTCG-
-NNNGGGGCGCCCCCNN
 C T A G C G T A A C T G A T C G A C T G T A C G A C T G C T A G G T C A A T C G G T A C A T G C G T A C A G C T G T A C T A C G A C G T
A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

Klf4/MA0039.2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAGGGGGGAGCCCTCG
-TGGGTGGGGC-----
 C T A G C G T A A C T G A T C G A C T G T A C G A C T G C T A G G T C A A T C G G T A C A T G C G T A C A G C T G T A C T A C G
A C G T C G A T T C A G C T A G A T C G G A C T C A T G A C T G C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GAGGGGGGAGCCCTCG
RGKGGGCGKGGC-----
 A C G T C T A G C G T A A C T G A T C G A C T G T A C G A C T G C T A G G T C A A T C G G T A C A T G C G T A C A G C T G T A C T A C G
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C A C G T A C G T A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGGGGGGAGCCCTCG
GTGGGGGGGG------
 C T A G C G T A A C T G A T C G A C T G T A C G A C T G C T A G G T C A A T C G G T A C A T G C G T A C A G C T G T A C T A C G
C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GAGGGGGGAGCCCTCG
GGGGGCGGGGC-----
 C T A G C G T A A C T G A T C G A C T G T A C G A C T G C T A G G T C A A T C G G T A C A T G C G T A C A G C T G T A C T A C G
T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T A C G T A C G T