Information for 16-GTCTGCACTT (Motif 39)

A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C G T
Reverse Opposite:
C G T A G T C A A C T G A C G T A C T G A G T C C G T A A C T G C G T A A G T C
p-value:1e-2
log p-value:-5.299e+00
Information Content per bp:1.961
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif11.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets61.6 +/- 21.8bp
Average Position of motif in Background42.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GTCTGCACTT
VBSYGTCTGG----
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:2
Score:0.70
Offset:-5
Orientation:reverse strand
Alignment:-----GTCTGCACTT--
NCTANGTCAGCAAATTT
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGCACTT-
NGTCAGCANTTT
 A C G T A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCACTT
CTGTCTGG----
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:GTCTGCACTT-
GTCAGCANNTN
 A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0042.1_Mafk_1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTCTGCACTT---
AAGTCAGCANTTTTN
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTCTGCACTT
TWGTCTGV----
 A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C G T
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GTCTGCACTT--
HWWGTCAGCAWWTTT
 A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

PB0104.1_Zscan4_1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTCTGCACTT---
NTNTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTCTGCACTT---
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C T G A C G T A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G