Information for 12-CAGCTGGGGCACATCT (Motif 18)

A G T C C G T A A C T G A G T C A G C T A C T G A C T G A C T G A C T G G A T C C G T A A G T C C G T A A G C T A G T C A C G T
Reverse Opposite:
C G T A A C T G C T G A C G A T A C T G A C G T C A T G A G T C A G T C A G T C A G T C C T G A A C T G A G T C A C G T C T A G
p-value:1e-9
log p-value:-2.186e+01
Information Content per bp:1.933
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.0 +/- 26.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer

Match Rank:1
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGGGGCACATCT---
VCAKCTGGNNNCCAGMTGBN
 A C G T A G T C C G T A A C T G A G T C A G C T A C T G A C T G A C T G A C T G G A T C C G T A A G T C C G T A A G C T A G T C A C G T A C G T A C G T A C G T
T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CAGCTGGGGCACATCT
NNNNTTGGGCACNNCN
 A G T C C G T A A C T G A G T C A G C T A C T G A C T G A C T G A C T G G A T C C G T A A G T C C G T A A G C T A G T C A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGGGGCACATCT
NAACAGCTGG---------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G C T A C T G A C T G A C T G A C T G G A T C C G T A A G T C C G T A A G C T A G T C A C G T
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGGGGCACATCT
NAHCAGCTGD---------
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G C T A C T G A C T G A C T G A C T G G A T C C G T A A G T C C G T A A G C T A G T C A C G T
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGGGGCACATCT
GACAGCTGCAG-------
 A C G T A C G T A G T C C G T A A C T G A G T C A G C T A C T G A C T G A C T G A C T G G A T C C G T A A G T C C G T A A G C T A G T C A C G T
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGGGGCACATCT
NCAGCTGCTG-------
 A C G T A G T C C G T A A C T G A G T C A G C T A C T G A C T G A C T G A C T G G A T C C G T A A G T C C G T A A G C T A G T C A C G T
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGGGGCACATCT
AACAGCTGCAG-------
 A C G T A C G T A G T C C G T A A C T G A G T C A G C T A C T G A C T G A C T G A C T G G A T C C G T A A G T C C G T A A G C T A G T C A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTGGGGCACATCT
NVCAGCTGBBNN------
 A C G T A C G T A G T C C G T A A C T G A G T C A G C T A C T G A C T G A C T G A C T G G A T C C G T A A G T C C G T A A G C T A G T C A C G T
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGGGGCACATCT
DCHCAGCAGGRGGCC----
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A G C T A C T G A C T G A C T G A C T G G A T C C G T A A G T C C G T A A G C T A G T C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGGGGCACATCT
AACAGCTG----------
 A C G T A C G T A G T C C G T A A C T G A G T C A G C T A C T G A C T G A C T G A C T G G A T C C G T A A G T C C G T A A G C T A G T C A C G T
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T