Information for 8-CGCTCCCTTCADAGGC (Motif 11)

G T A C A C T G A T G C C G A T A T G C A G T C A T G C A C G T C G A T G T A C C T G A C A T G G T C A A T C G A C T G A G T C
Reverse Opposite:
A C T G A G T C A T G C A C G T G A T C A G C T A C T G C G T A C G T A A T C G A C T G A T C G C G T A A T C G T G A C C A T G
p-value:1e-9
log p-value:-2.299e+01
Information Content per bp:1.770
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets69.5 +/- 13.8bp
Average Position of motif in Background47.3 +/- 32.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TATA-Box(TBP)/Promoter/Homer

Match Rank:1
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGCTCCCTTCADAGGC
----CCTTTTATAGNC
 G T A C A C T G A T G C C G A T A T G C A G T C A T G C A C G T C G A T G T A C C T G A C A T G G T C A A T C G A C T G A G T C
A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CGCTCCCTTCADAGGC
---TNCCATATATGG-
 G T A C A C T G A T G C C G A T A T G C A G T C A T G C A C G T C G A T G T A C C T G A C A T G G T C A A T C G A C T G A G T C
A C G T A C G T A C G T C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G A C G T

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGCTCCCTTCADAGGC
-GCTCCG---------
 G T A C A C T G A T G C C G A T A T G C A G T C A T G C A C G T C G A T G T A C C T G A C A T G G T C A A T C G A C T G A G T C
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:4
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:CGCTCCCTTCADAGGC-
---TNCCATATATGGNA
 G T A C A C T G A T G C C G A T A T G C A G T C A T G C A C G T C G A T G T A C C T G A C A T G G T C A A T C G A C T G A G T C A C G T
A C G T A C G T A C G T C A G T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A C G A T C T A G C A T G C G T A C G T A

PB0184.1_Tbp_2/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CGCTCCCTTCADAGGC
-GNNCGCTTAAATCGG
 G T A C A C T G A T G C C G A T A T G C A G T C A T G C A C G T C G A T G T A C C T G A C A T G G T C A A T C G A C T G A G T C
A C G T C A T G T A C G C A G T G T A C A T C G T A G C C G A T C A G T C G T A C G T A C T G A G C A T A T G C T A C G A C T G

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-CGCTCCCTTCADAGGC
NNGCACCTTTCTCC---
 A C G T G T A C A C T G A T G C C G A T A T G C A G T C A T G C A C G T C G A T G T A C C T G A C A T G G T C A A T C G A C T G A G T C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.48
Offset:1
Orientation:forward strand
Alignment:CGCTCCCTTCADAGGC
-NGTCCCNNGGGA---
 G T A C A C T G A T G C C G A T A T G C A G T C A T G C A C G T C G A T G T A C C T G A C A T G G T C A A T C G A C T G A G T C
A C G T C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:8
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----CGCTCCCTTCADAGGC
GGTCCCGCCCCCTTCTC----
 A C G T A C G T A C G T A C G T A C G T G T A C A C T G A T G C C G A T A T G C A G T C A T G C A C G T C G A T G T A C C T G A C A T G G T C A A T C G A C T G A G T C
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T A C G T A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:9
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CGCTCCCTTCADAGGC
ACTTGCTACCTACACC---
 A C G T A C G T A C G T G T A C A C T G A T G C C G A T A T G C A G T C A T G C A C G T C G A T G T A C C T G A C A T G G T C A A T C G A C T G A G T C
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C A C G T A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---CGCTCCCTTCADAGGC
ACATGCTACCTAATAC---
 A C G T A C G T A C G T G T A C A C T G A T G C C G A T A T G C A G T C A T G C A C G T C G A T G T A C C T G A C A T G G T C A A T C G A C T G A G T C
C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C A C G T A C G T A C G T