Information for 3-AGGGGCTGAGGCTGGA (Motif 4)

C G T A C T A G A T C G A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C T G A C T G C T G A
Reverse Opposite:
A G C T A G T C A G T C G T C A A T C G A G T C A G T C A C G T A G T C G T C A A C T G A G T C A G T C A T G C A G T C A C G T
p-value:1e-11
log p-value:-2.708e+01
Information Content per bp:1.885
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.6 +/- 22.2bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGGGCTGAGGCTGGA---
SMCAGTCWGAKGGAGGAGGC
 A C G T C G T A C T A G A T C G A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C T G A C T G C T G A A C G T A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGGGGCTGAGGCTGGA
--TGCCTGAGGCN---
 C G T A C T A G A T C G A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C T G A C T G C T G A
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGGGGCTGAGGCTGGA-
--GGGNGGGGGCGGGGC
 C G T A C T A G A T C G A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C T G A C T G C T G A A C G T
A C G T A C G T T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

TFAP2A/MA0003.3/Jaspar

Match Rank:4
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:AGGGGCTGAGGCTGGA
--NGCCTGAGGCN---
 C G T A C T A G A T C G A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C T G A C T G C T G A
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

PLAG1/MA0163.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGGGGCTGAGGCTGGA
-GGGGCCCAAGGGGG-
 C G T A C T A G A T C G A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C T G A C T G C T G A
A C G T A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGGGGCTGAGGCTGGA
--AGCCTCAGGCA---
 C G T A C T A G A T C G A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C T G A C T G C T G A
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-AGGGGCTGAGGCTGGA
AGGGGGCGGGGCTG---
 A C G T C G T A C T A G A T C G A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C T G A C T G C T G A
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGGGGCTGAGGCTGGA
ATTGCCTGAGGCAAT-
 C G T A C T A G A T C G A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C T G A C T G C T G A
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGCTGAGGCTGGA
NNTNNGGGGCGGNGNGN---
 A C G T A C G T A C G T A C G T C G T A C T A G A T C G A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C T G A C T G C T G A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGGGGCTGAGGCTGGA
WTGSCCTSAGGS----
 C G T A C T A G A T C G A C T G A C T G A G T C A C G T A C T G C G T A A C T G A C T G A T G C A C G T A C T G A C T G C T G A
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T