Information for 6-CAGTCACCTTTGA (Motif 13)

A G T C C G T A A C T G A C G T A G T C C T G A A G T C A G T C A C G T A C G T C G A T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A G T C A C G T A A C T G A C T G A G C T A C T G C G T A A G T C C G A T A C T G
p-value:1e-9
log p-value:-2.101e+01
Information Content per bp:1.935
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.0 +/- 20.9bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2f6/MA0677.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CAGTCACCTTTGA----
---TGACCTTTGACCTN
 A G T C C G T A A C T G A C G T A G T C C T G A A G T C A G T C A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

RXRG/MA0856.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CAGTCACCTTTGA----
---TGACCTTTGACCCC
 A G T C C G T A A C T G A C G T A G T C C T G A A G T C A G T C A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C

Rxra/MA0512.2/Jaspar

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CAGTCACCTTTGA----
---TGACCTTTGACCCC
 A G T C C G T A A C T G A C G T A G T C C T G A A G T C A G T C A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C A G T G C A T G A C T A G C A G C T G A C T A G C T T C A G T G C A G T A C G T A C A G T C A G T C

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCACCTTTGA--
NNNGTGACCTTTGNNN
 A C G T A G T C C G T A A C T G A C G T A G T C C T G A A G T C A G T C A C G T A C G T C G A T A C T G C G T A A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

RXRB/MA0855.1/Jaspar

Match Rank:5
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CAGTCACCTTTGA----
---TGACCTTTGACCCC
 A G T C C G T A A C T G A C G T A G T C C T G A A G T C A G T C A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:CAGTCACCTTTGA----
---TGACCTTTGACCTC
 A G T C C G T A A C T G A C G T A G T C C T G A A G T C A G T C A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.65
Offset:6
Orientation:reverse strand
Alignment:CAGTCACCTTTGA---
------CCTTTGATGT
 A G T C C G T A A C T G A C G T A G T C C T G A A G T C A G T C A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:8
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:CAGTCACCTTTGA---
------CCTTTGAWGT
 A G T C C G T A A C T G A C G T A G T C C T G A A G T C A G T C A C G T A C G T C G A T A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCACCTTTGA--
NNNNTGACCTTTNNNN
 A C G T A G T C C G T A A C T G A C G T A G T C C T G A A G T C A G T C A C G T A C G T C G A T A C T G C G T A A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CAGTCACCTTTGA
--CTGACCTTTG-
 A G T C C G T A A C T G A C G T A G T C C T G A A G T C A G T C A C G T A C G T C G A T A C T G C G T A
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T