Information for 5-GGTCAGGCCTCAG (Motif 8)

A C T G A T C G A C G T A G T C C G T A A C T G A T C G A T G C A G T C A C G T A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G C G T A A C T G A T C G A T G C A G T C A C G T A C T G G T C A A T G C G T A C
p-value:1e-11
log p-value:-2.755e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.8 +/- 29.3bp
Average Position of motif in Background66.4 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GGTCAGGCCTCAG
--CNAGGCCT---
 A C T G A T C G A C G T A G T C C G T A A C T G A T C G A T G C A G T C A C G T A G T C C G T A A C T G
A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGTCAGGCCTCAG----
---CAGGCCNNGGCCNN
 A C T G A T C G A C G T A G T C C G T A A C T G A T C G A T G C A G T C A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGTCAGGCCTCAG
--CTAGGCCT---
 A C T G A T C G A C G T A G T C C G T A A C T G A T C G A T G C A G T C A C G T A G T C C G T A A C T G
A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T A C G T

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGGCCTCAG
CNGTCACGCCAC--
 A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A T G C A G T C A C G T A G T C C G T A A C T G
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GGTCAGGCCTCAG-----
------GCCTCAGGGCAT
 A C T G A T C G A C G T A G T C C G T A A C T G A T C G A T G C A G T C A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T

NR2C2/MA0504.1/Jaspar

Match Rank:6
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGGCCTCAG
AGGGGTCAGAGGTCA-
 A C G T A C G T A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A T G C A G T C A C G T A G T C C G T A A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTCAGGCCTCAG
NNGGCCACGCCTTTN
 A C G T A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A T G C A G T C A C G T A G T C C G T A A C T G
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:8
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGTCAGGCCTCAG
GAGGTCAAAGGTCA-
 A C G T A C G T A C T G A T C G A C G T A G T C C G T A A C T G A T C G A T G C A G T C A C G T A G T C C G T A A C T G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

PAX1/MA0779.1/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGTCAGGCCTCAG----
CGTCACGCATGACTGCA
 A C T G A T C G A C G T A G T C C G T A A C T G A T C G A T G C A G T C A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T
A T G C C A T G G C A T G A T C T G C A G A T C C A T G A T G C G C T A G A C T A T C G T C G A T A G C G A C T C A T G T G A C G T C A

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:10
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GGTCAGGCCTCAG-----
------SCCTSAGGSCAW
 A C T G A T C G A C G T A G T C C G T A A C T G A T C G A T G C A G T C A C G T A G T C C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T