Information for 9-AATACAACAA (Motif 33)

C G T A C G T A A C G T C G T A A G T C C G T A C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G A C G T A C G T A C T G A C G T C G T A A C G T A C G T
p-value:1e-6
log p-value:-1.435e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.7 +/- 20.5bp
Average Position of motif in Background47.1 +/- 2.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AATACAACAA---
NTTNAGAACAATTA
 A C G T C G T A C G T A A C G T C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AATACAACAA----
ATATCAAAACAAAACA
 A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0120.1_Foxj1_2/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AATACAACAA---
ATGTCACAACAACAC
 A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

PB0122.1_Foxk1_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AATACAACAA--
CAAACAACAACACCT
 A C G T A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0067.1_Sox18_1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AATACAACAA-----
NNTNANAACAATTNNA
 A C G T C G T A C G T A A C G T C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AATACAACAA---
---RNAACAATGG
 C G T A C G T A A C G T C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0093.1_Zfp105_1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AATACAACAA---
AACAAACAACAAGAG
 A C G T A C G T C G T A C G T A A C G T C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:AATACAACAA-
-----AACAAT
 C G T A C G T A A C G T C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

PB0032.1_IRC900814_1/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AATACAACAA-----
ATTTACGACAAATAGC
 A C G T C G T A C G T A A C G T C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

PB0119.1_Foxa2_2/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AATACAACAA----
AAAAATAACAAACGG
 A C G T C G T A C G T A A C G T C G T A A G T C C G T A C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G