Information for 17-CTGAAGCTGGCAGCTA (Motif 30)

A G T C A C G T A C T G G T C A C G T A A C T G G T A C C A G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T C G T A
Reverse Opposite:
A C G T C G T A A C T G G T A C A C G T A C T G A G T C A G T C G C T A A C T G A G T C A C G T A C G T A G T C G T C A A C T G
p-value:1e-8
log p-value:-1.992e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.5 +/- 11.2bp
Average Position of motif in Background39.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTGAAGCTGGCAGCTA
--CAAGATGGCGGC--
 A G T C A C G T A C T G G T C A C G T A A C T G G T A C C A G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T C G T A
A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CTGAAGCTGGCAGCTA
--CAAGATGGCGGC--
 A G T C A C G T A C T G G T C A C G T A A C T G G T A C C A G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T C G T A
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T

GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer

Match Rank:3
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CTGAAGCTGGCAGCTA-
CNGCTGNNGNNNNCAGATAA
 A C G T A C G T A C G T A G T C A C G T A C T G G T C A C G T A A C T G G T A C C A G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T C G T A A C G T
T G A C C T A G A C T G T A G C C G A T A C T G A T G C C A T G A T C G A T C G A T C G T A G C C T G A T A G C G C T A A C T G C G T A A G C T C G T A C T G A

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CTGAAGCTGGCAGCTA
----GGTTGGCAT---
 A G T C A C G T A C T G G T C A C G T A A C T G G T A C C A G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T C G T A
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTGAAGCTGGCAGCTA
-NGAAGC---------
 A G T C A C G T A C T G G T C A C G T A A C T G G T A C C A G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T C G T A
A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GATA1::TAL1/MA0140.2/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTGAAGCTGGCAGCTA--
CTGNNNNNNNCAGATAAG
 A G T C A C G T A C T G G T C A C G T A A C T G G T A C C A G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T C G T A A C G T A C G T
T A G C C G A T A C T G A G T C C G A T A G T C A T G C C A G T A G T C T G C A T A G C C G T A A C T G C G T A A C G T C G T A C T G A A C T G

Myb/MA0100.2/Jaspar

Match Rank:7
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:CTGAAGCTGGCAGCTA-
-------TGGCAGTTGN
 A G T C A C G T A C T G G T C A C G T A A C T G G T A C C A G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CTGAAGCTGGCAGCTA
----ARNTGACA----
 A G T C A C G T A C T G G T C A C G T A A C T G G T A C C A G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T C G T A
A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:CTGAAGCTGGCAGCTA
-----CTTGGCAA---
 A G T C A C G T A C T G G T C A C G T A A C T G G T A C C A G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:CTGAAGCTGGCAGCTA
-----VBTGWCAGCB-
 A G T C A C G T A C T G G T C A C G T A A C T G G T A C C A G T A C T G A C T G G T A C C G T A A C T G A G T C A C G T C G T A
A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C A C G T