Information for 2-ACTMCTGAATSCCATT (Motif 2)

G T C A A G T C C G A T T G A C A T G C A C G T A T C G C G T A T G C A A C G T T A C G A G T C G T A C G C T A A C G T A C G T
Reverse Opposite:
G T C A C G T A C G A T C A T G T C A G A T G C C G T A A C G T A C G T A T G C C G T A A T C G A C T G C G T A T C A G A C G T
p-value:1e-16
log p-value:-3.783e+01
Information Content per bp:1.727
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.4 +/- 19.4bp
Average Position of motif in Background77.1 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:forward strand
Alignment:ACTMCTGAATSCCATT---
----TTGAATGAAATTCGA
 G T C A A G T C C G A T T G A C A T G C A C G T A T C G C G T A T G C A A C G T T A C G A G T C G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

PH0121.1_Obox1/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACTMCTGAATSCCATT--
-NTAGTTAATCCCCTTAN
 G T C A A G T C C G A T T G A C A T G C A C G T A T C G C G T A T G C A A C G T T A C G A G T C G T A C G C T A A C G T A C G T A C G T A C G T
A C G T C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A

Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACTMCTGAATSCCATT--
ACATCTGGWWTYAATTAR
 G T C A A G T C C G A T T G A C A T G C A C G T A T C G C G T A T G C A A C G T T A C G A G T C G T A C G C T A A C G T A C G T A C G T A C G T
T G C A G T A C C G T A A C G T T G A C C G A T A C T G A C T G C G A T C G A T G C A T A G C T G C T A C T G A A C G T G A C T G C T A C T G A

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:reverse strand
Alignment:ACTMCTGAATSCCATT--
------TAATTNVATTAN
 G T C A A G T C C G A T T G A C A T G C A C G T A T C G C G T A T G C A A C G T T A C G A G T C G T A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

PH0035.1_Gsc/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACTMCTGAATSCCATT-
AATCGTTAATCCCTTTA
 G T C A A G T C C G A T T G A C A T G C A C G T A T C G C G T A T G C A A C G T T A C G A G T C G T A C G C T A A C G T A C G T A C G T
G C T A T C G A G C A T G T A C T C A G G A C T C G A T C T G A C G T A A C G T G A T C A G T C A T G C A G C T C A G T G C A T T G A C

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:6
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:ACTMCTGAATSCCATT--
------TAATYNRATTAR
 G T C A A G T C C G A T T G A C A T G C A C G T A T C G C G T A T G C A A C G T T A C G A G T C G T A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

PB0178.1_Sox8_2/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--ACTMCTGAATSCCATT
NNTNTCATGAATGT----
 A C G T A C G T G T C A A G T C C G A T T G A C A T G C A C G T A T C G C G T A T G C A A C G T T A C G A G T C G T A C G C T A A C G T A C G T
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ACTMCTGAATSCCATT--
-NTTGTTAATCCCTCTNN
 G T C A A G T C C G A T T G A C A T G C A C G T A T C G C G T A T G C A A C G T T A C G A G T C G T A C G C T A A C G T A C G T A C G T A C G T
A C G T C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:9
Score:0.52
Offset:6
Orientation:forward strand
Alignment:ACTMCTGAATSCCATT--
------TAATCHGATTAC
 G T C A A G T C C G A T T G A C A T G C A C G T A T C G C G T A T G C A A C G T T A C G A G T C G T A C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

Sox1/MA0870.1/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:forward strand
Alignment:ACTMCTGAATSCCATT---
----AACAATAACATTGTT
 G T C A A G T C C G A T T G A C A T G C A C G T A T C G C G T A T G C A A C G T T A C G A G T C G T A C G C T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A G C T A A G T C G T C A G T C A C G A T C G T A T C G A A T G C C G T A A C G T A G C T A C T G G A C T A G C T