Information for 2-ACATMACCAGTTC (Motif 9)

C G T A A T G C C G T A A G C T G T C A C G T A A T G C A G T C G T C A A T C G G C A T G A C T A T G C
Reverse Opposite:
T A C G C T G A C G T A A T G C C A G T A C T G T A C G A C G T A C G T T C G A C G A T A T C G A C G T
p-value:1e-11
log p-value:-2.673e+01
Information Content per bp:1.721
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.70%
Number of Background Sequences with motif31.8
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets50.6 +/- 27.9bp
Average Position of motif in Background42.4 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:1
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ACATMACCAGTTC-
----MRSCACTYAA
 C G T A A T G C C G T A A G C T G T C A C G T A A T G C A G T C G T C A A T C G G C A T G A C T A T G C A C G T
A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PH0004.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:ACATMACCAGTTC-----
-CATAACCACTTAACAAC
 C G T A A T G C C G T A A G C T G T C A C G T A A T G C A G T C G T C A A T C G G C A T G A C T A T G C A C G T A C G T A C G T A C G T A C G T
A C G T T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

DUXA/MA0884.1/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---ACATMACCAGTTC
CTAATTTAATCAA---
 A C G T A C G T A C G T C G T A A T G C C G T A A G C T G T C A C G T A A T G C A G T C G T C A A T C G G C A T G A C T A T G C
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:4
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ACATMACCAGTTC--
-----ACCACTTGAA
 C G T A A T G C C G T A A G C T G T C A C G T A A T G C A G T C G T C A A T C G G C A T G A C T A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

PH0040.1_Hmbox1/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--ACATMACCAGTTC--
GANGTTAACTAGTTTNN
 A C G T A C G T C G T A A T G C C G T A A G C T G T C A C G T A A T G C A G T C G T C A A T C G G C A T G A C T A T G C A C G T A C G T
T A C G G C T A G C A T T C A G G C A T G C A T C G T A G T C A A G T C A G C T G T C A T C A G G C A T G A C T G A C T C G A T A G T C

MF0005.1_Forkhead_class/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACATMACCAGTTC
AAATAAACA----
 C G T A A T G C C G T A A G C T G T C A C G T A A T G C A G T C G T C A A T C G G C A T G A C T A T G C
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:7
Score:0.55
Offset:2
Orientation:forward strand
Alignment:ACATMACCAGTTC------
--ATAACCACTTGAAAATT
 C G T A A T G C C G T A A G C T G T C A C G T A A T G C A G T C G T C A A T C G G C A T G A C T A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

DUX4/MA0468.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--ACATMACCAGTTC
TAATTTAATCA----
 A C G T A C G T C G T A A T G C C G T A A G C T G T C A C G T A A T G C A G T C G T C A A T C G G C A T G A C T A T G C
G C A T C T G A C G T A G A C T A G C T A G C T G T C A C G T A A C G T A G T C C G T A A C G T A C G T A C G T A C G T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ACATMACCAGTTC-
----AAGCACTTAA
 C G T A A T G C C G T A A G C T G T C A C G T A A T G C A G T C G T C A A T C G G C A T G A C T A T G C A C G T
A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

GRHL1/MA0647.1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACATMACCAGTTC-
--AAAACCGGTTTT
 C G T A A T G C C G T A A G C T G T C A C G T A A T G C A G T C G T C A A T C G G C A T G A C T A T G C A C G T
A C G T A C G T G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T