Information for 11-GCGTTCAGCA (Motif 41)

A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A C G T A C T G C G T A C G T A A G T C A C T G A G T C
p-value:1e-5
log p-value:-1.242e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.0 +/- 12.8bp
Average Position of motif in Background33.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:GCGTTCAGCA----
---GTCAGCANNTN
 A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Mafb/MA0117.2/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCGTTCAGCA----
--NGTCAGCANTTT
 A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCGTTCAGCA--
SCTGTCARCACC
 A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A C G T
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGTTCAGCA
TGAGTCAGCA
 A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A G T C C G T A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCGTTCAGCA----
CTGAGTCAGCAATTT
 A C G T A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCGTTCAGCA-----
HWWGTCAGCAWWTTT
 A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

MAFF/MA0495.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GCGTTCAGCA------
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCGTTCAGCA
-----CAGCC
 A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GCGTTCAGCA--
--DCTCAGCAGG
 A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A G T C C G T A A C G T A C G T
A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

BARHL2/MA0635.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GCGTTCAGCA
ANCGTTTANN-
 A C G T A C T G A G T C A C T G A C G T A C G T A G T C C G T A A C T G A G T C C G T A
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C A C G T