Information for 18-DCWHCARSCARGGCTR (Motif 38)

C G T A A T G C C G A T G A T C G A T C C T G A C T A G T A C G G T A C G T C A C T A G T A C G T C A G A T G C A G C T T C A G
Reverse Opposite:
A G T C C T G A A T C G A G T C A T G C A G T C A C G T C A T G A T G C A G T C G A C T C T A G C A T G G C T A A T C G G C A T
p-value:1e-7
log p-value:-1.784e+01
Information Content per bp:1.582
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif259.2
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets45.5 +/- 22.9bp
Average Position of motif in Background48.9 +/- 30.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.61
Offset:11
Orientation:reverse strand
Alignment:DCWHCARSCARGGCTR
-----------NGCTN
 C G T A A T G C C G A T G A T C G A T C C T G A C T A G T A C G G T A C G T C A C T A G T A C G T C A G A T G C A G C T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:DCWHCARSCARGGCTR
-------CNAGGCCT-
 C G T A A T G C C G A T G A T C G A T C C T G A C T A G T A C G G T A C G T C A C T A G T A C G T C A G A T G C A G C T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:forward strand
Alignment:DCWHCARSCARGGCTR-
--GTCATGCHTGRCTGS
 C G T A A T G C C G A T G A T C G A T C C T G A C T A G T A C G G T A C G T C A C T A G T A C G T C A G A T G C A G C T T C A G A C G T
A C G T A C G T A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:DCWHCARSCARGGCTR-
-NGTCACGCTTGGCTGC
 C G T A A T G C C G A T G A T C G A T C C T G A C T A G T A C G G T A C G T C A C T A G T A C G T C A G A T G C A G C T T C A G A C G T
A C G T C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

PB0099.1_Zfp691_1/Jaspar

Match Rank:5
Score:0.52
Offset:4
Orientation:forward strand
Alignment:DCWHCARSCARGGCTR-----
----CGAACAGTGCTCACTAT
 C G T A A T G C C G A T G A T C G A T C C T G A C T A G T A C G G T A C G T C A C T A G T A C G T C A G A T G C A G C T T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

PB0180.1_Sp4_2/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:DCWHCARSCARGGCTR--
---NNGGCCACGCCTTTN
 C G T A A T G C C G A T G A T C G A T C C T G A C T A G T A C G G T A C G T C A C T A G T A C G T C A G A T G C A G C T T C A G A C G T A C G T
A C G T A C G T A C G T G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.52
Offset:9
Orientation:forward strand
Alignment:DCWHCARSCARGGCTR-
---------TWGTCTGV
 C G T A A T G C C G A T G A T C G A T C C T G A C T A G T A C G G T A C G T C A C T A G T A C G T C A G A T G C A G C T T C A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.51
Offset:12
Orientation:forward strand
Alignment:DCWHCARSCARGGCTR--
------------GCTGTG
 C G T A A T G C C G A T G A T C G A T C C T G A C T A G T A C G G T A C G T C A C T A G T A C G T C A G A T G C A G C T T C A G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

PB0199.1_Zfp161_2/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:DCWHCARSCARGGCTR
--GCCGCGCAGTGCGT
 C G T A A T G C C G A T G A T C G A T C C T G A C T A G T A C G G T A C G T C A C T A G T A C G T C A G A T G C A G C T T C A G
A C G T A C G T C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:DCWHCARSCARGGCTR
-------CTAGGCCT-
 C G T A A T G C C G A T G A T C G A T C C T G A C T A G T A C G G T A C G T C A C T A G T A C G T C A G A T G C A G C T T C A G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T