Information for 7-TGGAGGCGCACGA (Motif 17)

A C G T A C T G A C T G C T G A C T A G A C T G G T A C C T A G A T G C G T C A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C G T A T C G A G T C A C T G A G T C A G T C A G C T T G A C A G T C C G T A
p-value:1e-11
log p-value:-2.542e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.2 +/- 31.4bp
Average Position of motif in Background65.1 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGGAGGCGCACGA---
NNTTTGCACACGGCCC
 A C G T A C T G A C T G C T G A C T A G A C T G G T A C C T A G A T G C G T C A A G T C A C T G C G T A A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0008.1_E2F2_1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGGAGGCGCACGA-
ATAAAGGCGCGCGAT
 A C G T A C G T A C T G A C T G C T G A C T A G A C T G G T A C C T A G A T G C G T C A A G T C A C T G C G T A A C G T
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T

PB0052.1_Plagl1_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGAGGCGCACGA--
TTGGGGGCGCCCCTAG
 A C G T A C G T A C T G A C T G C T G A C T A G A C T G G T A C C T A G A T G C G T C A A G T C A C T G C G T A A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGGAGGCGCACGA-
AAGGKGRCGCAGGCA
 A C G T A C G T A C T G A C T G C T G A C T A G A C T G G T A C C T A G A T G C G T C A A G T C A C T G C G T A A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGGAGGCGCACGA-
ATAAGGGCGCGCGAT
 A C G T A C G T A C T G A C T G C T G A C T A G A C T G G T A C C T A G A T G C G T C A A G T C A C T G C G T A A C G T
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGGAGGCGCACGA--
-----GAGSCCGAGC
 A C G T A C T G A C T G C T G A C T A G A C T G G T A C C T A G A T G C G T C A A G T C A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGGAGGCGCACGA----
-CGAAGCACACAAAATA
 A C G T A C T G A C T G C T G A C T A G A C T G G T A C C T A G A T G C G T C A A G T C A C T G C G T A A C G T A C G T A C G T A C G T
A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TGGAGGCGCACGA--
-------GCACGTNC
 A C G T A C T G A C T G C T G A C T A G A C T G G T A C C T A G A T G C G T C A A G T C A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:TGGAGGCGCACGA--
-------GCACGTAY
 A C G T A C T G A C T G C T G A C T A G A C T G G T A C C T A G A T G C G T C A A G T C A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

Hes1/MA1099.1/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:forward strand
Alignment:TGGAGGCGCACGA---
------GGCACGCGTC
 A C G T A C T G A C T G C T G A C T A G A C T G G T A C C T A G A T G C G T C A A G T C A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C