Information for 5-AGCAAACACA (Motif 6)

T C G A C T A G A G T C T G C A T C G A G C T A T A G C C G T A A T G C G T C A
Reverse Opposite:
C A G T T A C G G C A T A T C G C G A T A G C T A C G T T C A G G A T C A G C T
p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.624
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif3.13%
Number of Background Sequences with motif284.4
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets51.8 +/- 25.2bp
Average Position of motif in Background46.6 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--AGCAAACACA
WAAGTAAAYA--
 A C G T A C G T T C G A C T A G A G T C T G C A T C G A G C T A T A G C C G T A A T G C G T C A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AGCAAACACA-
CAAAAGTAAACAAAG
 A C G T A C G T A C G T A C G T T C G A C T A G A G T C T G C A T C G A G C T A T A G C C G T A A T G C G T C A A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

FOXP2/MA0593.1/Jaspar

Match Rank:3
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-AGCAAACACA
AAGTAAACAAA
 A C G T T C G A C T A G A G T C T G C A T C G A G C T A T A G C C G T A A T G C G T C A
C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A

FOXP3/MA0850.1/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:AGCAAACACA
-GTAAACA--
 T C G A C T A G A G T C T G C A T C G A G C T A T A G C C G T A A T G C G T C A
A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.74
Offset:-7
Orientation:forward strand
Alignment:-------AGCAAACACA
NNNVCTGWGYAAACASN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C T G C A T C G A G C T A T A G C C G T A A T G C G T C A
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:6
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGCAAACACA
-GTAAACAG-
 T C G A C T A G A G T C T G C A T C G A G C T A T A G C C G T A A T G C G T C A
A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--AGCAAACACA
AAAGTAAACA--
 A C G T A C G T T C G A C T A G A G T C T G C A T C G A G C T A T A G C C G T A A T G C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:8
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AGCAAACACA
-GTAAACA--
 T C G A C T A G A G T C T G C A T C G A G C T A T A G C C G T A A T G C G T C A
A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T

MF0005.1_Forkhead_class/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AGCAAACACA
AAATAAACA--
 A C G T T C G A C T A G A G T C T G C A T C G A G C T A T A G C C G T A A T G C G T C A
T C G A G T C A T C G A G A C T G T C A C T G A T C G A G A T C C G T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:10
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--AGCAAACACA
AAAGTAAACA--
 A C G T A C G T T C G A C T A G A G T C T G C A T C G A G C T A T A G C C G T A A T G C G T C A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T