Information for 4-GGCGCGGGSACACACA (Motif 11)

A C T G A C T G G T A C A C T G A G T C A C T G A T C G A C T G A T C G C G T A A T G C C G T A A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G A C G T A T C G A C G T A T C G G T A C A T G C G T A C A C T G A G T C A C T G G T A C A G T C
p-value:1e-9
log p-value:-2.147e+01
Information Content per bp:1.863
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets78.0 +/- 9.0bp
Average Position of motif in Background37.9 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGCGCGGGSACACACA---
---AGCGGCACACACGCAA
 A C T G A C T G G T A C A C T G A G T C A C T G A T C G A C T G A T C G C G T A A T G C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

POL006.1_BREu/Jaspar

Match Rank:2
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGCGCGGGSACACACA
GGCGCGCT--------
 A C T G A C T G G T A C A C T G A G T C A C T G A T C G A C T G A T C G C G T A A T G C C G T A A G T C C G T A A G T C C G T A
C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.52
Offset:3
Orientation:forward strand
Alignment:GGCGCGGGSACACACA
---CCAGGAACAG---
 A C T G A C T G G T A C A C T G A G T C A C T G A T C G A C T G A T C G C G T A A T G C C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGCGCGGGSACACACA
TGGCGCGCGCGCCTGA-
 A C G T A C T G A C T G G T A C A C T G A G T C A C T G A T C G A C T G A T C G C G T A A T G C C G T A A G T C C G T A A G T C C G T A
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.51
Offset:6
Orientation:forward strand
Alignment:GGCGCGGGSACACACA
------GCCACACCCA
 A C T G A C T G G T A C A C T G A G T C A C T G A T C G A C T G A T C G C G T A A T G C C G T A A G T C C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GGCGCGGGSACACACA---
-------GGACACACCCCC
 A C T G A C T G G T A C A C T G A G T C A C T G A T C G A C T G A T C G C G T A A T G C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.51
Offset:5
Orientation:reverse strand
Alignment:GGCGCGGGSACACACA-
-----GGCCACACCCAN
 A C T G A C T G G T A C A C T G A G T C A C T G A T C G A C T G A T C G C G T A A T G C C G T A A G T C C G T A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

PB0208.1_Zscan4_2/Jaspar

Match Rank:8
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GGCGCGGGSACACACA---
---CGAAGCACACAAAATA
 A C T G A C T G G T A C A C T G A G T C A C T G A T C G A C T G A T C G C G T A A T G C C G T A A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

PB0009.1_E2F3_1/Jaspar

Match Rank:9
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCGGGSACACACA
ATAAGGGCGCGCGAT------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C A C T G A G T C A C T G A T C G A C T G A T C G C G T A A T G C C G T A A G T C C G T A A G T C C G T A
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:10
Score:0.49
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCGGGSACACACA
ATAAAGGCGCGCGAT------
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C A C T G A G T C A C T G A T C G A C T G A T C G C G T A A T G C C G T A A G T C C G T A A G T C C G T A
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T