Information for 6-GCKGTCCCTGTGT (Motif 6)

A C T G A T G C A C T G A C T G A C G T A T G C G T A C A G T C A C G T A C T G A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C G T C A A G T C C G T A A C T G A C T G A T C G C G T A A G T C G T A C A T C G A G T C
p-value:1e-13
log p-value:-3.067e+01
Information Content per bp:1.846
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets42.4 +/- 22.0bp
Average Position of motif in Background35.9 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.62
Offset:6
Orientation:forward strand
Alignment:GCKGTCCCTGTGT
------GCTGTG-
 A C T G A T G C A C T G A C T G A C G T A T G C G T A C A G T C A C G T A C T G A C G T A C T G A G C T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCKGTCCCTGTGT
-CTGTTCCTGG--
 A C T G A T G C A C T G A C T G A C G T A T G C G T A C A G T C A C G T A C T G A C G T A C T G A G C T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GCKGTCCCTGTGT
NNNCAGCTGTCAATATN-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C T G A C G T A T G C G T A C A G T C A C G T A C T G A C G T A C T G A G C T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GCKGTCCCTGTGT
BNTGDCCTTG---
 A C T G A T G C A C T G A C T G A C G T A T G C G T A C A G T C A C G T A C T G A C G T A C T G A G C T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T

HINFP/MA0131.2/Jaspar

Match Rank:5
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCKGTCCCTGTGT
NCGCGGACGTTG---
 A C G T A C G T A C T G A T G C A C T G A C T G A C G T A T G C G T A C A G T C A C G T A C T G A C G T A C T G A G C T
T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCKGTCCCTGTGT
AGGVNCCTTTGT--
 A C G T A C T G A T G C A C T G A C T G A C G T A T G C G T A C A G T C A C G T A C T G A C G T A C T G A G C T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GCKGTCCCTGTGT
AAGCACCTGTCAATAT--
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A C T G A C T G A C G T A T G C G T A C A G T C A C G T A C T G A C G T A C T G A G C T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCKGTCCCTGTGT
--ACTTCCTGTT-
 A C T G A T G C A C T G A C T G A C G T A T G C G T A C A G T C A C G T A C T G A C G T A C T G A G C T
A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCKGTCCCTGTGT
-CACTTCCTGT--
 A C T G A T G C A C T G A C T G A C G T A T G C G T A C A G T C A C G T A C T G A C G T A C T G A G C T
A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GCKGTCCCTGTGT
--ATTTCCTGTN-
 A C T G A T G C A C T G A C T G A C G T A T G C G T A C A G T C A C G T A C T G A C G T A C T G A G C T
A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T A C G T