Information for 4-GCAGGKCACGTGVCGC (Motif 4)

A C T G A T G C G T C A A C T G A T C G C A G T A G T C C G T A A G T C A C T G C G A T A T C G T G A C A T G C A T C G G T A C
Reverse Opposite:
A C T G T A G C A T C G A C T G A T G C G C T A A G T C C T A G A C G T A C T G G T C A A T G C G T A C A C G T A T C G G T A C
p-value:1e-17
log p-value:-3.933e+01
Information Content per bp:1.741
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.48%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.4 +/- 25.8bp
Average Position of motif in Background66.9 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GCAGGKCACGTGVCGC
---GGTCACGTGA---
 A C T G A T G C G T C A A C T G A T C G C A G T A G T C C G T A A G T C A C T G C G A T A T C G T G A C A T G C A T C G G T A C
A C G T A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GCAGGKCACGTGVCGC
-CCGGTCACGTGA---
 A C T G A T G C G T C A A C T G A T C G C A G T A G T C C G T A A G T C A C T G C G A T A T C G T G A C A T G C A T C G G T A C
A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T A C G T

BHLHE40/MA0464.2/Jaspar

Match Rank:3
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:GCAGGKCACGTGVCGC
----GTCACGTGAN--
 A C T G A T G C G T C A A C T G A T C G C A G T A G T C C G T A A G T C A C T G C G A T A T C G T G A C A T G C A T C G G T A C
A C G T A C G T A C G T A C G T C T A G C A G T T G A C C T G A A G T C C T A G A C G T C A T G G T C A A C G T A C G T A C G T

Arntl/MA0603.1/Jaspar

Match Rank:4
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GCAGGKCACGTGVCGC
---GGTCACGTGC---
 A C T G A T G C G T C A A C T G A T C G C A G T A G T C C G T A A G T C A C T G C G A T A T C G T G A C A T G C A T C G G T A C
A C G T A C G T A C G T C A T G T C A G C A G T G T A C G C T A A G T C C T A G G A C T C A T G G A T C A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:5
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:GCAGGKCACGTGVCGC
----GTCACGTGNT--
 A C T G A T G C G T C A A C T G A T C G C A G T A G T C C G T A A G T C A C T G C G A T A T C G T G A C A T G C A T C G G T A C
A C G T A C G T A C G T A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T A C G T A C G T

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.72
Offset:3
Orientation:forward strand
Alignment:GCAGGKCACGTGVCGC
---GGTCACGTGG---
 A C T G A T G C G T C A A C T G A T C G C A G T A G T C C G T A A G T C A C T G C G A T A T C G T G A C A T G C A T C G G T A C
A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G A C G T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:GCAGGKCACGTGVCGC
---NGKCACGTGM---
 A C T G A T G C G T C A A C T G A T C G C A G T A G T C C G T A A G T C A C T G C G A T A T C G T G A C A T G C A T C G G T A C
A C G T A C G T A C G T T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:8
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GCAGGKCACGTGVCGC
----GTCACGTGAC--
 A C T G A T G C G T C A A C T G A T C G C A G T A G T C C G T A A G T C A C T G C G A T A T C G T G A C A T G C A T C G G T A C
A C G T A C G T A C G T A C G T T C A G C A G T A G T C C G T A A G T C C T A G A G C T A T C G G T C A A G T C A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:9
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:GCAGGKCACGTGVCGC
---GGTCACGTGGC--
 A C T G A T G C G T C A A C T G A T C G C A G T A G T C C G T A A G T C A C T G C G A T A T C G T G A C A T G C A T C G G T A C
A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:10
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:GCAGGKCACGTGVCGC
----GTCACGTGAT--
 A C T G A T G C G T C A A C T G A T C G C A G T A G T C C G T A A G T C A C T G C G A T A T C G T G A C A T G C A T C G G T A C
A C G T A C G T A C G T A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T A C G T A C G T