Information for 20-CCGACAGCCCGCG (Motif 31)

A T G C A T G C A T C G T C G A A G T C C G T A A T C G A G T C A G T C A G T C C T A G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C A C T G A C T G C T A G A T G C A C G T A C T G A C G T A T G C A T C G A T C G
p-value:1e-7
log p-value:-1.770e+01
Information Content per bp:1.839
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets42.4 +/- 28.3bp
Average Position of motif in Background46.2 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLIS2/MA0736.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CCGACAGCCCGCG---
--GACCCCCCGCGAAG
 A T G C A T G C A T C G T C G A A G T C C G T A A T C G A G T C A G T C A G T C C T A G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G

GLIS1/MA0735.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CCGACAGCCCGCG----
-AGACCCCCCACGAAGC
 A T G C A T G C A T C G T C G A A G T C C G T A A T C G A G T C A G T C A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C

GLIS3/MA0737.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCGACAGCCCGCG---
--GACCCCCCACGAAG
 A T G C A T G C A T C G T C G A A G T C C G T A A T C G A G T C A G T C A G T C C T A G A G T C A C T G A C G T A C G T A C G T
A C G T A C G T A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCGACAGCCCGCG
CNGTCACGCCAC-
 A T G C A T G C A T C G T C G A A G T C C G T A A T C G A G T C A G T C A G T C C T A G A G T C A C T G
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CCGACAGCCCGCG
--CACAGN-----
 A T G C A T G C A T C G T C G A A G T C C G T A A T C G A G T C A G T C A G T C C T A G A G T C A C T G
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CCGACAGCCCGCG-----
----CAGGCCNNGGCCNN
 A T G C A T G C A T C G T C G A A G T C C G T A A T C G A G T C A G T C A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCGACAGCCCGCG----
---TCCGCCCCCGCATT
 A T G C A T G C A T C G T C G A A G T C C G T A A T C G A G T C A G T C A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCGACAGCCCGCG
-GGACCACCCACG
 A T G C A T G C A T C G T C G A A G T C C G T A A T C G A G T C A G T C A G T C C T A G A G T C A C T G
A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CCGACAGCCCGCG----
--GACCCCCCGCTGTGC
 A T G C A T G C A T C G T C G A A G T C C G T A A T C G A G T C A G T C A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

ZIC3/MA0697.1/Jaspar

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCGACAGCCCGCG----
--GACCCCCCGCTGCGC
 A T G C A T G C A T C G T C G A A G T C C G T A A T C G A G T C A G T C A G T C C T A G A G T C A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C