Information for 4-CGCCCTTGGT (Motif 15)

G A T C A T C G A T G C A G T C A T G C A C G T C G A T A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C C G T A G T C A A T C G C T A G A T C G A T G C C A T G
p-value:1e-11
log p-value:-2.649e+01
Information Content per bp:1.844
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets57.9 +/- 23.5bp
Average Position of motif in Background67.9 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCTTGGT---
NTGCCCTTGGGCGN
 A C G T G A T C A T C G A T G C A G T C A T G C A C G T C G A T A C T G A C T G A C G T A C G T A C G T A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CGCCCTTGGT---
TCACCTCTGGGCAG
 A C G T G A T C A T C G A T G C A G T C A T G C A C G T C G A T A C T G A C T G A C G T A C G T A C G T A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGCCCTTGGT
TGACCTTGAN
 G A T C A T C G A T G C A G T C A T G C A C G T C G A T A C T G A C T G A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCTTGGT
BNTGDCCTTG--
 A C G T A C G T G A T C A T C G A T G C A G T C A T G C A C G T C G A T A C T G A C T G A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CGCCCTTGGT-
---CCTTTGTT
 G A T C A T C G A T G C A G T C A T G C A C G T C G A T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGCCCTTGGT
TGACCTTGAV
 G A T C A T C G A T G C A G T C A T G C A C G T C G A T A C T G A C T G A C G T
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Znf423/MA0116.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGCCCTTGGT---
GCACCCCTGGGTGCC
 A C G T A C G T G A T C A T C G A T G C A G T C A T G C A C G T C G A T A C T G A C T G A C G T A C G T A C G T A C G T
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGCCCTTGGT
CTGACCTTTG-
 A C G T G A T C A T C G A T G C A G T C A T G C A C G T C G A T A C T G A C T G A C G T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGCCCTTGGT--
NNNNATGACCTTGANTN
 A C G T A C G T A C G T A C G T A C G T G A T C A T C G A T G C A G T C A T G C A C G T C G A T A C T G A C T G A C G T A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

Sox3/MA0514.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CGCCCTTGGT---
---CCTTTGTTTT
 G A T C A T C G A T G C A G T C A T G C A C G T C G A T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T