Information for 3-CGGAGCTCTGTCC (Motif 8)

A G T C C T A G A C T G C T G A A C T G A G T C C A G T A T G C A C G T A C T G A G C T A T G C A G T C
Reverse Opposite:
A C T G A T C G C T G A G T A C C G T A A T C G G C T A A C T G A G T C A G C T A G T C A G T C C T A G
p-value:1e-11
log p-value:-2.709e+01
Information Content per bp:1.801
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif21.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets52.2 +/- 24.2bp
Average Position of motif in Background56.2 +/- 18.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CGGAGCTCTGTCC-
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A G T C C T A G A C T G C T G A A C T G A G T C C A G T A T G C A C G T A C T G A G C T A T G C A G T C A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGGAGCTCTGTCC
CGGAGC-------
 A G T C C T A G A C T G C T G A A C T G A G T C C A G T A T G C A C G T A C T G A G C T A T G C A G T C
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGAGCTCTGTCC---
-TGACCTCTGACCCCN
 A G T C C T A G A C T G C T G A A C T G A G T C C A G T A T G C A C G T A C T G A G C T A T G C A G T C A C G T A C G T A C G T
A C G T G A C T T C A G T G C A G T A C A G T C A G C T A G T C G A C T T A C G G T C A G T A C T G A C A G T C A G T C A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CGGAGCTCTGTCC--
-TGACCTTTGCCCTA
 A G T C C T A G A C T G C T G A A C T G A G T C C A G T A T G C A C G T A C T G A G C T A T G C A G T C A C G T A C G T
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGGAGCTCTGTCC--
-TGACCTTTGACCTC
 A G T C C T A G A C T G C T G A A C T G A G T C C A G T A T G C A C G T A C T G A G C T A T G C A G T C A C G T A C G T
A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CGGAGCTCTGTCC---
-TGACCTTTGCCCTAN
 A G T C C T A G A C T G C T G A A C T G A G T C C A G T A T G C A C G T A C T G A G C T A T G C A G T C A C G T A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGAGCTCTGTCC--
-TGACCTTTGCCCCA
 A G T C C T A G A C T G C T G A A C T G A G T C C A G T A T G C A C G T A C T G A G C T A T G C A G T C A C G T A C G T
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGAGCTCTGTCC
-GGGGGTGTGTCC
 A G T C C T A G A C T G C T G A A C T G A G T C C A G T A T G C A C G T A C T G A G C T A T G C A G T C
A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

HNF4G/MA0484.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGAGCTCTGTCC---
-TGGACTTTGNNCTCN
 A G T C C T A G A C T G C T G A A C T G A G T C C A G T A T G C A C G T A C T G A G C T A T G C A G T C A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGGAGCTCTGTCC----
-TGGACTTTGNNCTNTG
 A G T C C T A G A C T G C T G A A C T G A G T C C A G T A T G C A C G T A C T G A G C T A T G C A G T C A C G T A C G T A C G T A C G T
A C G T C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G