Information for 6-AGTSCCTGGGGCASTC (Motif 7)

C T G A A T C G A C G T A T G C A G T C G T A C A C G T A C T G C T A G A C T G A C T G A G T C C G T A A T G C A C G T T A G C
Reverse Opposite:
A T C G G T C A A T C G C G A T A C T G A G T C A G T C A G T C A G T C C G T A A C T G A C T G A T C G C G T A A T G C A G C T
p-value:1e-12
log p-value:-2.772e+01
Information Content per bp:1.812
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.3 +/- 26.2bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A/MA0003.3/Jaspar

Match Rank:1
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AGTSCCTGGGGCASTC
--NGCCTGAGGCN---
 C T G A A T C G A C G T A T G C A G T C G T A C A C G T A C T G C T A G A C T G A C T G A G T C C G T A A T G C A C G T T A G C
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:AGTSCCTGGGGCASTC
--TGCCTGAGGCN---
 C T G A A T C G A C G T A T G C A G T C G T A C A C G T A C T G C T A G A C T G A C T G A G T C C G T A A T G C A C G T T A G C
A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:reverse strand
Alignment:AGTSCCTGGGGCASTC
--NGCCTNAGGCN---
 C T G A A T C G A C G T A T G C A G T C G T A C A C G T A C T G C T A G A C T G A C T G A G T C C G T A A T G C A C G T T A G C
A C G T A C G T G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.71
Offset:0
Orientation:forward strand
Alignment:AGTSCCTGGGGCASTC
ATTGCCTGAGGCAAT-
 C T G A A T C G A C G T A T G C A G T C G T A C A C G T A C T G C T A G A C T G A C T G A G T C C G T A A T G C A C G T T A G C
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AGTSCCTGGGGCASTC
ANTGCCTGAGGCAAN-
 C T G A A T C G A C G T A T G C A G T C G T A C A C G T A C T G C T A G A C T G A C T G A G T C C G T A A T G C A C G T T A G C
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGTSCCTGGGGCASTC
ATTGCCTGAGGCGAA-
 C T G A A T C G A C G T A T G C A G T C G T A C A C G T A C T G C T A G A C T G A C T G A G T C C G T A A T G C A C G T T A G C
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGTSCCTGGGGCASTC
WTGSCCTSAGGS----
 C T G A A T C G A C G T A T G C A G T C G T A C A C G T A C T G C T A G A C T G A C T G A G T C C G T A A T G C A C G T T A G C
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGTSCCTGGGGCASTC
ATTCCCTGAGGGGAA-
 C T G A A T C G A C G T A T G C A G T C G T A C A C G T A C T G C T A G A C T G A C T G A G T C C G T A A T G C A C G T T A G C
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGTSCCTGGGGCASTC
ATGCCCTGAGGC----
 C T G A A T C G A C G T A T G C A G T C G T A C A C G T A C T G C T A G A C T G A C T G A G T C C G T A A T G C A C G T T A G C
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGTSCCTGGGGCASTC
NGTCCCNNGGGA----
 C T G A A T C G A C G T A T G C A G T C G T A C A C G T A C T G C T A G A C T G A C T G A G T C C G T A A T G C A C G T T A G C
C T A G A T C G G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A A C G T A C G T A C G T A C G T