Information for 3-TGTTTGCTTA (Motif 6)

A G C T C T A G A C G T A G C T A C G T C T A G A T G C A G C T A C G T C G T A
Reverse Opposite:
A C G T T G C A C T G A T A C G G A T C C G T A C T G A C G T A A G T C C T G A
p-value:1e-12
log p-value:-2.807e+01
Information Content per bp:1.844
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.64%
Number of Background Sequences with motif136.4
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets45.4 +/- 25.2bp
Average Position of motif in Background49.9 +/- 31.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:1
Score:0.84
Offset:0
Orientation:forward strand
Alignment:TGTTTGCTTA
TRTTTACTTW
 A G C T C T A G A C G T A G C T A C G T C T A G A T G C A G C T A C G T C G T A
A C G T C T A G A G C T A C G T A C G T C T G A A G T C G A C T A G C T C G T A

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCTTA
TGTTTACTTT
 A G C T C T A G A C G T A G C T A C G T C T A G A T G C A G C T A C G T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCTTA
TGTTTACTTT
 A G C T C T A G A C G T A G C T A C G T C T A G A T G C A G C T A C G T C G T A
A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGCTTA-----
NSTGTTTRCWCAGBNNN
 A C G T A C G T A G C T C T A G A C G T A G C T A C G T C T A G A T G C A G C T A C G T C G T A A C G T A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----TGTTTGCTTA-
TCCATGTTTACTTTG
 A C G T A C G T A C G T A C G T A G C T C T A G A C G T A G C T A C G T C T A G A T G C A G C T A C G T C G T A A C G T
G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

FOXC2/MA0846.1/Jaspar

Match Rank:6
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGCTTA
TTTGTTTACTTA
 A C G T A C G T A G C T C T A G A C G T A G C T A C G T C T A G A T G C A G C T A C G T C G T A
C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A

MF0005.1_Forkhead_class/Jaspar

Match Rank:7
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TGTTTGCTTA
TGTTTATTT-
 A G C T C T A G A C G T A G C T A C G T C T A G A T G C A G C T A C G T C G T A
G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T A C G T

Foxa2/MA0047.2/Jaspar

Match Rank:8
Score:0.75
Offset:0
Orientation:forward strand
Alignment:TGTTTGCTTA--
TGTTTACTTAGG
 A G C T C T A G A C G T A G C T A C G T C T A G A T G C A G C T A C G T C G T A A C G T A C G T
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--TGTTTGCTTA
CNTGTTTACATA
 A C G T A C G T A G C T C T A G A C G T A G C T A C G T C T A G A T G C A G C T A C G T C G T A
A T G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A G A T C G C T A A G C T C G T A

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGCTTA
TNTGTTTACTT-
 A C G T A C G T A G C T C T A G A C G T A G C T A C G T C T A G A T G C A G C T A C G T C G T A
G A C T A G C T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C A T G A C T A C G T