Information for 20-TCCTTGTCTTCAG (Motif 41)

A C G T A G T C A G T C A C G T A C G T A T C G A C G T A G T C A C G T A C G T A T G C G T C A C T A G
Reverse Opposite:
A G T C A C G T A T C G C G T A C G T A A C T G C G T A A T G C C G T A C G T A A C T G A C T G C G T A
p-value:1e-6
log p-value:-1.443e+01
Information Content per bp:1.934
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets32.8 +/- 26.8bp
Average Position of motif in Background69.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox6/MA0515.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TCCTTGTCTTCAG
CCATTGTTTT---
 A C G T A G T C A G T C A C G T A C G T A T C G A C G T A G T C A C G T A C G T A T G C G T C A C T A G
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TCCTTGTCTTCAG
TTCTTATCTGT--
 A C G T A G T C A G T C A C G T A C G T A T C G A C G T A G T C A C G T A C G T A T G C G T C A C T A G
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T

Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TCCTTGTCTTCAG
NNCTTATCTN---
 A C G T A G T C A G T C A C G T A C G T A T C G A C G T A G T C A C G T A C G T A T G C G T C A C T A G
A G C T A G T C A T G C A G C T A C G T C G T A A C G T A G T C C G A T A T G C A C G T A C G T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TCCTTGTCTTCAG
NCCTTATCTG---
 A C G T A G T C A G T C A C G T A C G T A T C G A C G T A G T C A C G T A C G T A T G C G T C A C T A G
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G A C G T A C G T A C G T

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCCTTGTCTTCAG
-YCTTATCTBN--
 A C G T A G T C A G T C A C G T A C G T A T C G A C G T A G T C A C G T A C G T A T G C G T C A C T A G
A C G T A G C T A T G C G A C T G C A T C G T A A G C T G T A C C G A T A T C G A G T C A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCCTTGTCTTCAG--
CCATTGTATGCAAAT
 A C G T A G T C A G T C A C G T A C G T A T C G A C G T A G T C A C G T A C G T A T G C G T C A C T A G A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCCTTGTCTTCAG
-TCTTATCT----
 A C G T A G T C A G T C A C G T A C G T A T C G A C G T A G T C A C G T A C G T A T G C G T C A C T A G
A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCCTTGTCTTCAG
-TCTTATCTCCC-
 A C G T A G T C A G T C A C G T A C G T A T C G A C G T A G T C A C G T A C G T A T G C G T C A C T A G
A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TCCTTGTCTTCAG
-CTTTGT------
 A C G T A G T C A G T C A C G T A C G T A T C G A C G T A G T C A C G T A C G T A T G C G T C A C T A G
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TCCTTGTCTTCAG
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A T C G A C G T A G T C A C G T A C G T A T G C G T C A C T A G
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G