Information for 18-GGAGCAAATAGAT (Motif 38)

A C T G A C T G C G T A A C T G G T A C C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G A T
Reverse Opposite:
C G T A A C G T A G T C G C A T C G T A A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C
p-value:1e-6
log p-value:-1.566e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.8 +/- 18.9bp
Average Position of motif in Background40.1 +/- 12.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAAATAGAT
CGGAGC--------
 A C G T A C T G A C T G C G T A A C T G G T A C C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G A T
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GGAGCAAATAGAT
WAAGTAAAYA---
 A C T G A C T G C G T A A C T G G T A C C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G A T
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T

ONECUT1/MA0679.1/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGAGCAAATAGAT---
--AAAAAATCGATAAT
 A C T G A C T G C G T A A C T G G T A C C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G A T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A C G T A G C T A C T G A C T G A A C G T A G T C C T A G C G T A G A C T C G T A G C T A G A C T

ONECUT2/MA0756.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GGAGCAAATAGAT---
--AAAAAATCGATAAT
 A C T G A C T G C G T A A C T G G T A C C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G A T A C G T A C G T A C G T
A C G T A C G T T C G A C T G A C G T A G C T A C T G A C T G A A C G T G T A C T C A G G C T A G C A T C G T A G C T A G C A T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAAATAGAT
NACAGGAAAT----
 A C G T A C T G A C T G C G T A A C T G G T A C C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G A T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCAAATAGAT
GGGAGGACNG----
 A C G T A C T G A C T G C G T A A C T G G T A C C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G A T
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.54
Offset:-5
Orientation:forward strand
Alignment:-----GGAGCAAATAGAT
NNNVCTGWGYAAACASN-
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G C G T A A C T G G T A C C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G A T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:8
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:GGAGCAAATAGAT----
-------ATTGATTYND
 A C T G A C T G C G T A A C T G G T A C C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

PB0171.1_Sox18_2/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGAGCAAATAGAT---
GGACTGAATTCATGCC
 A C T G A C T G C G T A A C T G G T A C C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G A T A C G T A C G T A C G T
C T A G A C T G C T G A A T G C A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A C G A T C T A G G T A C T G A C

Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GGAGCAAATAGAT--
-----TAATTGATTA
 A C T G A C T G C G T A A C T G G T A C C G T A C G T A C G T A A C G T C G T A A C T G C G T A C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G A T T C G A C G T A A G C T A C G T C T A G C T G A A C G T A G C T G C T A