Information for 3-MTGTCAAGMTGACCTT (Motif 3)

T G C A C G A T A C T G C A G T A G T C G C T A C G T A T A C G T G A C A C G T A C T G G T C A G T A C A G T C A G C T A C G T
Reverse Opposite:
C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C T G A G T C G C A T C A G T A C T G G T C A A G T C G C T A A C G T
p-value:1e-21
log p-value:-5.035e+01
Information Content per bp:1.746
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 30.2bp
Average Position of motif in Background20.3 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:MTGTCAAGMTGACCTT
-GGTCANNGTGACCTN
 T G C A C G A T A C T G C A G T A G T C G C T A C G T A T A C G T G A C A C G T A C T G G T C A G T A C A G T C A G C T A C G T
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

ESR2/MA0258.2/Jaspar

Match Rank:2
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:MTGTCAAGMTGACCTT
AGGNCANNGTGACCT-
 T G C A C G A T A C T G C A G T A G T C G C T A C G T A T A C G T G A C A C G T A C T G G T C A G T A C A G T C A G C T A C G T
C T G A C T A G C T A G C A G T A G T C C G T A A T C G A C T G T A C G G C A T T A C G T G C A G A T C G T A C G A C T A C G T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-MTGTCAAGMTGACCTT
AAGGTCACGGTGACCTG
 A C G T T G C A C G A T A C T G C A G T A G T C G C T A C G T A T A C G T G A C A C G T A C T G G T C A G T A C A G T C A G C T A C G T
C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.71
Offset:9
Orientation:reverse strand
Alignment:MTGTCAAGMTGACCTT-
---------TGACCTYA
 T G C A C G A T A C T G C A G T A G T C G C T A C G T A T A C G T G A C A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.70
Offset:8
Orientation:forward strand
Alignment:MTGTCAAGMTGACCTT--
--------NTGACCTTGA
 T G C A C G A T A C T G C A G T A G T C G C T A C G T A T A C G T G A C A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.69
Offset:5
Orientation:reverse strand
Alignment:MTGTCAAGMTGACCTT-----
-----NNNGTGACCTTTGNNN
 T G C A C G A T A C T G C A G T A G T C G C T A C G T A T A C G T G A C A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.69
Offset:8
Orientation:reverse strand
Alignment:MTGTCAAGMTGACCTT
--------GTGACCTT
 T G C A C G A T A C T G C A G T A G T C G C T A C G T A T A C G T G A C A C G T A C T G G T C A G T A C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.69
Offset:8
Orientation:reverse strand
Alignment:MTGTCAAGMTGACCTT--
--------ATGACCTTGA
 T G C A C G A T A C T G C A G T A G T C G C T A C G T A T A C G T G A C A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A

RORA/MA0071.1/Jaspar

Match Rank:9
Score:0.69
Offset:9
Orientation:reverse strand
Alignment:MTGTCAAGMTGACCTT---
---------TGACCTTGAT
 T G C A C G A T A C T G C A G T A G T C G C T A C G T A T A C G T G A C A C G T A C T G G T C A G T A C A G T C A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.69
Offset:9
Orientation:reverse strand
Alignment:MTGTCAAGMTGACCTT
---------TGACCT-
 T G C A C G A T A C T G C A G T A G T C G C T A C G T A T A C G T G A C A C G T A C T G G T C A G T A C A G T C A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T