Information for 10-CAGGTCTGGGTGT (Motif 24)

A G T C T G C A A C T G A T C G A G C T A T G C A C G T A C T G A C T G T A C G C A G T A C T G C A G T
Reverse Opposite:
G C T A T G A C G T C A A G T C G T A C T A G C C G T A A T C G T C G A A T G C T G A C A C G T C T A G
p-value:1e-8
log p-value:-2.053e+01
Information Content per bp:1.754
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif145.9
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets32.7 +/- 19.4bp
Average Position of motif in Background50.8 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTCTGGGTGT-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A G T C T G C A A C T G A T C G A G C T A T G C A C G T A C T G A C T G T A C G C A G T A C T G C A G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGGTCTGGGTGT
VBSYGTCTGG----
 A C G T A G T C T G C A A C T G A T C G A G C T A T G C A C G T A C T G A C T G T A C G C A G T A C T G C A G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAGGTCTGGGTGT
-CTGTCTGG----
 A G T C T G C A A C T G A T C G A G C T A T G C A C G T A C T G A C T G T A C G C A G T A C T G C A G T
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAGGTCTGGGTGT
--GGTCTGGCAT-
 A G T C T G C A A C T G A T C G A G C T A T G C A C G T A C T G A C T G T A C G C A G T A C T G C A G T
A C G T A C G T A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CAGGTCTGGGTGT
GGGGCTYGKCTGGGA--
 A C G T A C G T A C G T A C G T A G T C T G C A A C T G A T C G A G C T A T G C A C G T A C T G A C T G T A C G C A G T A C T G C A G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CAGGTCTGGGTGT
CAGGTGAGG----
 A G T C T G C A A C T G A T C G A G C T A T G C A C G T A C T G A C T G T A C G C A G T A C T G C A G T
A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T A C G T A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CAGGTCTGGGTGT---
------TGGGTGTGGC
 A G T C T G C A A C T G A T C G A G C T A T G C A C G T A C T G A C T G T A C G C A G T A C T G C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:8
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CAGGTCTGGGTGT----
-----NTGGGTGTGGCC
 A G T C T G C A A C T G A T C G A G C T A T G C A C G T A C T G A C T G T A C G C A G T A C T G C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

Klf1/MA0493.1/Jaspar

Match Rank:9
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CAGGTCTGGGTGT----
------TGGGTGTGGCN
 A G T C T G C A A C T G A T C G A G C T A T G C A C G T A C T G A C T G T A C G C A G T A C T G C A G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGGTCTGGGTGT
-AGGCCTNG----
 A G T C T G C A A C T G A T C G A G C T A T G C A C G T A C T G A C T G T A C G C A G T A C T G C A G T
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T