Information for 9-TAATGGGGCA (Motif 23)

A C G T T G C A G T C A C G A T C T A G A C T G A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G G T A C A G T C A G T C A G T C C G T A A C G T A C G T C G T A
p-value:1e-8
log p-value:-2.066e+01
Information Content per bp:1.837
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif41.5
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets47.5 +/- 33.1bp
Average Position of motif in Background51.8 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TAATGGGGCA-----
NNNNTTGGGCACNNCN
 A C G T A C G T T G C A G T C A C G A T C T A G A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:TAATGGGGCA
----AGGTCA
 A C G T T G C A G T C A C G A T C T A G A C T G A C T G A C T G A G T C C G T A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TAATGGGGCA----
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T T G C A G T C A C G A T C T A G A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:forward strand
Alignment:TAATGGGGCA
--AGRGGTCA
 A C G T T G C A G T C A C G A T C T A G A C T G A C T G A C T G A G T C C G T A
A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TAATGGGGCA-
--NGTGGGCAT
 A C G T T G C A G T C A C G A T C T A G A C T G A C T G A C T G A G T C C G T A A C G T
A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TAATGGGGCA-----
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T T G C A G T C A C G A T C T A G A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0053.1_Rara_1/Jaspar

Match Rank:7
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TAATGGGGCA----
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T T G C A G T C A C G A T C T A G A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

NR2F1/MA0017.2/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TAATGGGGCA----
-CAAAGGTCAAGGG
 A C G T T G C A G T C A C G A T C T A G A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

PB0118.1_Esrra_2/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAATGGGGCA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T T G C A G T C A C G A T C T A G A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TAATGGGGCA-----
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T T G C A G T C A C G A T C T A G A C T G A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A