Information for 12-CTAATTTACAAACACA (Motif 20)

A G T C A C G T T C G A C T G A C G A T C G A T C G A T C T G A G T A C C G T A C G T A G C T A A G T C C G T A T A G C C G T A
Reverse Opposite:
A C G T A C T G C G A T A C T G C G A T A C G T A C G T A C T G A G C T C G T A C G T A G C T A G A C T A G C T C G T A C T A G
p-value:1e-10
log p-value:-2.356e+01
Information Content per bp:1.752
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.1 +/- 26.7bp
Average Position of motif in Background48.0 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.63
Offset:8
Orientation:forward strand
Alignment:CTAATTTACAAACACA--
--------AAACCACANN
 A G T C A C G T T C G A C T G A C G A T C G A T C G A T C T G A G T A C C G T A C G T A G C T A A G T C C G T A T A G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

FOXP1/MA0481.1/Jaspar

Match Rank:2
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CTAATTTACAAACACA-
--CAAAAGTAAACAAAG
 A G T C A C G T T C G A C T G A C G A T C G A T C G A T C T G A G T A C C G T A C G T A G C T A A G T C C G T A T A G C C G T A A C G T
A C G T A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:CTAATTTACAAACACA--
--------AAACCACAGC
 A G T C A C G T T C G A C T G A C G A T C G A T C G A T C T G A G T A C C G T A C G T A G C T A A G T C C G T A T A G C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CTAATTTACAAACACA-
-------NAAACCACAG
 A G T C A C G T T C G A C T G A C G A T C G A T C G A T C T G A G T A C C G T A C G T A G C T A A G T C C G T A T A G C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CTAATTTACAAACACA---
-------NWAACCACADNN
 A G T C A C G T T C G A C T G A C G A T C G A T C G A T C T G A G T A C C G T A C G T A G C T A A G T C C G T A T A G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CTAATTTACAAACACA----
----AAAGTAAACAAAAATT
 A G T C A C G T T C G A C T G A C G A T C G A T C G A T C T G A G T A C C G T A C G T A G C T A A G T C C G T A T A G C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:CTAATTTACAAACACA---
--------AAACCACAGAN
 A G T C A C G T T C G A C T G A C G A T C G A T C G A T C T G A G T A C C G T A C G T A G C T A A G T C C G T A T A G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CTAATTTACAAACACA
---WWATRTAAACAN-
 A G T C A C G T T C G A C T G A C G A T C G A T C G A T C T G A G T A C C G T A C G T A G C T A A G T C C G T A T A G C C G T A
A C G T A C G T A C G T G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTAATTTACAAACACA
----WWTRTAAACAVG
 A G T C A C G T T C G A C T G A C G A T C G A T C G A T C T G A G T A C C G T A C G T A G C T A A G T C C G T A T A G C C G T A
A C G T A C G T A C G T A C G T C G T A G C T A C G A T C T A G A C G T G T C A C G T A C G T A A G T C C G T A T G C A T A C G

FOXP2/MA0593.1/Jaspar

Match Rank:10
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CTAATTTACAAACACA
-----AAGTAAACAAA
 A G T C A C G T T C G A C T G A C G A T C G A T C G A T C T G A G T A C C G T A C G T A G C T A A G T C C G T A T A G C C G T A
A C G T A C G T A C G T A C G T A C G T C T G A C G T A C T A G C G A T C G T A C G T A C G T A A G T C C G T A T C G A C T G A