Information for 2-TCTGKGTCACRGTGAC (Motif 2)

G C A T A G T C C G A T A C T G C A T G A C T G A C G T A G T C C G T A A T G C C T A G A T C G A G C T A T C G G C T A A G T C
Reverse Opposite:
C T A G C A G T A T G C C T G A A T G C G A C T A T C G A C G T T A C G C G T A A G T C G T A C A G T C C G T A T A C G C G T A
p-value:1e-24
log p-value:-5.727e+01
Information Content per bp:1.770
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.8 +/- 22.3bp
Average Position of motif in Background65.5 +/- 1.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:TCTGKGTCACRGTGAC---
----GGTCANNGTGACCTN
 G C A T A G T C C G A T A C T G C A T G A C T G A C G T A G T C C G T A A T G C C T A G A T C G A G C T A T C G G C T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

PPARG/MA0066.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:TCTGKGTCACRGTGAC-----
-GTAGGTCACGGTGACCTACT
 G C A T A G T C C G A T A C T G C A T G A C T G A C G T A G T C C G T A A T G C C T A G A T C G A G C T A T C G G C T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

ESR1/MA0112.3/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TCTGKGTCACRGTGAC---
--AAGGTCACGGTGACCTG
 G C A T A G T C C G A T A C T G C A T G A C T G A C G T A G T C C G T A A T G C C T A G A T C G A G C T A T C G G C T A A G T C A C G T A C G T A C G T
A C G T A C G T C T G A T C G A A C T G C T A G A C G T G A T C C T G A T G A C T A C G T C A G A G C T C T A G T C G A A T G C G T A C A G C T A C T G

ESR2/MA0258.2/Jaspar

Match Rank:4
Score:0.71
Offset:3
Orientation:forward strand
Alignment:TCTGKGTCACRGTGAC--
---AGGTCACCCTGACCT
 G C A T A G T C C G A T A C T G C A T G A C T G A C G T A G T C C G T A A T G C C T A G A T C G A G C T A T C G G C T A A G T C A C G T A C G T
A C G T A C G T A C G T C T G A C A T G C T A G A C G T A T G C C G T A A T G C T G A C T A G C G C A T T C A G G T C A G A T C G A T C G A C T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCTGKGTCACRGTGAC-
-GTAGGTCACTGGGTCA
 G C A T A G T C C G A T A C T G C A T G A C T G A C G T A G T C C G T A A T G C C T A G A T C G A G C T A T C G G C T A A G T C A C G T
A C G T A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TCTGKGTCACRGTGAC
CGCGCCGGGTCACGTA---
 A C G T A C G T A C G T G C A T A G T C C G A T A C T G C A T G A C T G A C G T A G T C C G T A A T G C C T A G A T C G A G C T A T C G G C T A A G T C
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TCTGKGTCACRGTGAC
--TGAGTCA-------
 G C A T A G T C C G A T A C T G C A T G A C T G A C G T A G T C C G T A A T G C C T A G A T C G A G C T A T C G G C T A A G T C
A C G T A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TCTGKGTCACRGTGAC---
-----GTCACGCTCNCTGA
 G C A T A G T C C G A T A C T G C A T G A C T G A C G T A G T C C G T A A T G C C T A G A T C G A G C T A T C G G C T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G G A C T A G T C C T G A G A T C T C A G A T G C G A C T A G T C A T G C T A G C A G C T A T C G T G C A

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCTGKGTCACRGTGAC
----AGTCACGC----
 G C A T A G T C C G A T A C T G C A T G A C T G A C G T A G T C C G T A A T G C C T A G A T C G A G C T A T C G G C T A A G T C
A C G T A C G T A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCTGKGTCACRGTGAC
TGCTGAGTCATNNTG--
 A C G T G C A T A G T C C G A T A C T G C A T G A C T G A C G T A G T C C G T A A T G C C T A G A T C G A G C T A T C G G C T A A G T C
G C A T A T C G A T G C G A C T C T A G C G T A T A C G A C G T G T A C C G T A A G C T A C T G A T G C G A C T C A T G A C G T A C G T