Information for 10-GGTCAGCAGCTGACCY (Motif 19)

C T A G A T C G A G C T A G T C C G T A A C T G T A G C C G T A T A C G A T G C C A G T A C T G G T C A A G T C G T A C A G T C
Reverse Opposite:
T C A G A C T G A C T G A C G T G T A C G T C A A T C G A G T C C G A T A C T G A G T C A C G T A C T G T C G A A T G C A G T C
p-value:1e-10
log p-value:-2.466e+01
Information Content per bp:1.712
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.39%
Number of Background Sequences with motif27.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets36.3 +/- 20.9bp
Average Position of motif in Background48.0 +/- 24.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.61
Offset:10
Orientation:reverse strand
Alignment:GGTCAGCAGCTGACCY
----------TGACCT
 C T A G A T C G A G C T A G T C C G T A A C T G T A G C C G T A T A C G A T G C C A G T A C T G G T C A A G T C G T A C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T

PB0003.1_Ascl2_1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GGTCAGCAGCTGACCY--
-CTCAGCAGCTGCTACTG
 C T A G A T C G A G C T A G T C C G T A A C T G T A G C C G T A T A C G A T G C C A G T A C T G G T C A A G T C G T A C A G T C A C G T A C G T
A C G T A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGTCAGCAGCTGACCY
DCHCAGCAGGRGGCC-
 C T A G A T C G A G C T A G T C C G T A A C T G T A G C C G T A T A C G A T G C C A G T A C T G G T C A A G T C G T A C A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.58
Offset:10
Orientation:reverse strand
Alignment:GGTCAGCAGCTGACCY--
----------TGACCYCT
 C T A G A T C G A G C T A G T C C G T A A C T G T A G C C G T A T A C G A T G C C A G T A C T G G T C A A G T C G T A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GGTCAGCAGCTGACCY
--NNAGCAGCTGCT--
 C T A G A T C G A G C T A G T C C G T A A C T G T A G C C G T A T A C G A T G C C A G T A C T G G T C A A G T C G T A C A G T C
A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGTCAGCAGCTGACCY
---CAGCAGCTGN---
 C T A G A T C G A G C T A G T C C G T A A C T G T A G C C G T A T A C G A T G C C A G T A C T G G T C A A G T C G T A C A G T C
A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.56
Offset:10
Orientation:reverse strand
Alignment:GGTCAGCAGCTGACCY--
----------TGACCTYA
 C T A G A T C G A G C T A G T C C G T A A C T G T A G C C G T A T A C G A T G C C A G T A C T G G T C A A G T C G T A C A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGTCAGCAGCTGACCY
---NNGCAGCTGTC--
 C T A G A T C G A G C T A G T C C G T A A C T G T A G C C G T A T A C G A T G C C A G T A C T G G T C A A G T C G T A C A G T C
A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGTCAGCAGCTGACCY
BTGACCTCTNNHTGACCY
 A C G T A C G T C T A G A T C G A G C T A G T C C G T A A C T G T A G C C G T A T A C G A T G C C A G T A C T G G T C A A G T C G T A C A G T C
A T C G A C G T A T C G T G C A G T A C A G T C A G C T A T G C C G A T T A C G A T G C G T A C G A C T T A C G T G C A G T A C G A T C A G C T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGTCAGCAGCTGACCY-
----TGCAGCTGTCCCT
 C T A G A T C G A G C T A G T C C G T A A C T G T A G C C G T A T A C G A T G C C A G T A C T G G T C A A G T C G T A C A G T C A C G T
A C G T A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T