Information for 7-GGGAGAGCCAAGTCAC (Motif 13)

A C T G A C T G A T C G C G T A A T C G G T C A A C T G G T A C G T A C C G T A C T G A A C T G A C G T G A T C C G T A A T G C
Reverse Opposite:
A T C G C G A T C A T G C G T A A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T G C A C G T A T G C A G T C A G T C
p-value:1e-11
log p-value:-2.586e+01
Information Content per bp:1.820
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets22.5 +/- 12.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

XBP1/MA0844.1/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGGAGAGCCAAGTCAC-
---AATGCCACGTCATC
 A C T G A C T G A T C G C G T A A T C G G T C A A C T G G T A C G T A C C G T A C T G A A C T G A C G T G A T C C G T A A T G C A C G T
A C G T A C G T A C G T C G T A C T G A A C G T C A T G G T A C A G T C C T G A G A T C C T A G A G C T T G A C C T G A A C G T A G T C

CREB3/MA0638.1/Jaspar

Match Rank:2
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGGAGAGCCAAGTCAC--
----GTGCCACGTCATCA
 A C T G A C T G A T C G C G T A A T C G G T C A A C T G G T A C G T A C C G T A C T G A A C T G A C G T G A T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A G C T C A T G G T A C A T G C C G T A A G T C C T A G G A C T T G A C C T G A A G C T G T A C T C G A

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GGGAGAGCCAAGTCAC
----AAGGCAAGTGT-
 A C T G A C T G A T C G C G T A A T C G G T C A A C T G G T A C G T A C C G T A C T G A A C T G A C G T G A T C C G T A A T G C
A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGGAGAGCCAAGTCAC--
----ATGCCACGTCATCA
 A C T G A C T G A T C G C G T A A T C G G T C A A C T G G T A C G T A C C G T A C T G A A C T G A C G T G A T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G A C T C T A G G T A C G A T C C T G A A T G C T C A G C G A T T G A C C T G A A G C T G A T C C T G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GGGAGAGCCAAGTCAC
RGGTCADNNAGAGGTCAV
 A C G T A C G T A C T G A C T G A T C G C G T A A T C G G T C A A C T G G T A C G T A C C G T A C T G A A C T G A C G T G A T C C G T A A T G C
C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGGAGAGCCAAGTCAC
AGGTGNCAGACAG-----
 A C G T A C G T A C T G A C T G A T C G C G T A A T C G G T C A A C T G G T A C G T A C C G T A C T G A A C T G A C G T G A T C C G T A A T G C
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GGGAGAGCCAAGTCAC
TGGAACAGMA-------
 A C G T A C T G A C T G A T C G C G T A A T C G G T C A A C T G G T A C G T A C C G T A C T G A A C T G A C G T G A T C C G T A A T G C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.50
Offset:7
Orientation:forward strand
Alignment:GGGAGAGCCAAGTCAC
-------AAAAGTCAA
 A C T G A C T G A T C G C G T A A T C G G T C A A C T G G T A C G T A C C G T A C T G A A C T G A C G T G A T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.50
Offset:8
Orientation:forward strand
Alignment:GGGAGAGCCAAGTCAC
--------AAGGTCAC
 A C T G A C T G A T C G C G T A A T C G G T C A A C T G G T A C G T A C C G T A C T G A A C T G A C G T G A T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.50
Offset:5
Orientation:forward strand
Alignment:GGGAGAGCCAAGTCAC
-----ATCAAGGTCA-
 A C T G A C T G A T C G C G T A A T C G G T C A A C T G G T A C G T A C C G T A C T G A A C T G A C G T G A T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T