Information for 23-GAACTACAAC (Motif 47)

A C T G C T G A G C T A A G T C C G A T T C G A A T G C C G T A C G T A T A G C
Reverse Opposite:
A T C G G C A T A C G T A T C G A G C T G C T A A C T G C G A T A G C T T G A C
p-value:1e-7
log p-value:-1.723e+01
Information Content per bp:1.722
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif3.84%
Number of Background Sequences with motif580.3
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets52.8 +/- 27.3bp
Average Position of motif in Background48.6 +/- 36.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0122.1_Foxk1_2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GAACTACAAC----
CAAACAACAACACCT
 A C G T A C T G C T G A G C T A A G T C C G A T T C G A A T G C C G T A C G T A T A G C A C G T A C G T A C G T A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GAACTACAAC-----
NNGATCTAGAACCTNNN
 A C G T A C G T A C T G C T G A G C T A A G T C C G A T T C G A A T G C C G T A C G T A T A G C A C G T A C G T A C G T A C G T A C G T
T C A G A C G T C T A G C G T A A G C T A G T C A C G T C T G A A C T G G C T A C G T A A G T C T G A C A G C T C G A T G T C A T A C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:3
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GAACTACAAC
AAACCACANN
 A C T G C T G A G C T A A G T C C G A T T C G A A T G C C G T A C G T A T A G C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GAACTACAAC
AAACCACAGC
 A C T G C T G A G C T A A G T C C G A T T C G A A T G C C G T A C G T A T A G C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAACTACAAC-
NWAACCACADNN
 A C G T A C T G C T G A G C T A A G T C C G A T T C G A A T G C C G T A C G T A T A G C A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAACTACAAC----
NGNTCTAGAACCNGV
 A C G T A C T G C T G A G C T A A G T C C G A T T C G A A T G C C G T A C G T A T A G C A C G T A C G T A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAACTACAAC
NAAACCACAG-
 A C G T A C T G C T G A G C T A A G T C C G A T T C G A A T G C C G T A C G T A T A G C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GAACTACAAC-
AAACCACAGAN
 A C T G C T G A G C T A A G T C C G A T T C G A A T G C C G T A C G T A T A G C A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GAACTACAAC
AAACCGCAA-
 A C T G C T G A G C T A A G T C C G A T T C G A A T G C C G T A C G T A T A G C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GAACTACAAC--
--RNAACAATGG
 A C T G C T G A G C T A A G T C C G A T T C G A A T G C C G T A C G T A T A G C A C G T A C G T
A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G