Information for 19-GGGAATAATT (Motif 43)

A C T G A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T
Reverse Opposite:
C G T A C G T A A C G T A C G T C G T A A C G T A C G T A G T C A G T C A G T C
p-value:1e-8
log p-value:-1.893e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets46.2 +/- 22.4bp
Average Position of motif in Background73.9 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.82
Offset:3
Orientation:forward strand
Alignment:GGGAATAATT
---AATAATT
 A C T G A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T
A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

PH0124.1_Obox5_1/Jaspar

Match Rank:2
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GGGAATAATT---
TAGAGGGATTAAATTTC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G C A T C T G A T C A G T C G A T C A G C T A G C A T G C G T A A C G T C G A T C G T A C G T A G C T A G A C T A G C T G C A T G T A C

PH0125.1_Obox5_2/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----GGGAATAATT---
NANAGGGATTAATTATN
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

PH0129.1_Otx1/Jaspar

Match Rank:4
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GGGAATAATT---
AGAGGGGATTAATTTAT
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C T A G C A T G C G T A C T A G T A C G C T A G C A T G G T C A A C G T C G A T C G T A C G T A G A C T G C A T G A C T G C T A A G C T

PH0130.1_Otx2/Jaspar

Match Rank:5
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----GGGAATAATT---
TGTAGGGATTAATTGTC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C T A G C G A T T C G A T C A G T C A G C A T G G T C A C G A T C G A T C G T A C T G A A G C T G A C T C T A G C A G T G A T C

PH0138.1_Pitx2/Jaspar

Match Rank:6
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GGGAATAATT---
TGAAGGGATTAATCATC
 A C G T A C G T A C G T A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
C A G T C A T G C G T A T C G A T C A G C T A G C A T G G T C A A G C T G A C T C G T A C T G A A G C T G A T C C T G A C G A T G A T C

PH0021.1_Dlx2/Jaspar

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GGGAATAATT-------
-GGAATAATTACCTCAG
 A C T G A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T C A G T C A G C T A G C T G A G A C T C G T A C G T A C G A T A C G T C T G A A T G C G A C T G A C T G T A C C T G A A C T G

Dlx2/MA0885.1/Jaspar

Match Rank:8
Score:0.69
Offset:4
Orientation:reverse strand
Alignment:GGGAATAATT--
----NTAATTGN
 A C T G A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T T G C A C G T A C A G T C A G T C T A G A T G C

PH0022.1_Dlx3/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGAATAATT------
TCGCGATAATTACCGAC
 A C G T A C T G A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

PH0106.1_Msx1/Jaspar

Match Rank:10
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGGAATAATT-------
-NNATTAATTAGTNGNN
 A C T G A C T G A C T G C G T A C G T A A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G T A T G C A G A C T G A C T C G T A C G T A A C G T A C G T C T G A C T A G G A C T C G A T C A T G A G T C T G C A