Information for 20-TAMTTTCAWTTTC (Motif 40)

A C G T C T G A G T A C A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C
Reverse Opposite:
A C T G C G T A C G T A C G T A C G A T C G A T A C T G C G T A C G T A C G T A A C T G A G C T C G T A
p-value:1e-8
log p-value:-2.062e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif6.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.3 +/- 18.9bp
Average Position of motif in Background42.5 +/- 46.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:TAMTTTCAWTTTC
-ACTTTCACTTTC
 A C G T C T G A G T A C A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C
A C G T C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.84
Offset:1
Orientation:forward strand
Alignment:TAMTTTCAWTTTC
-AGTTTCAGTTTC
 A C G T C T G A G T A C A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C
A C G T C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C

IRF1/MA0050.2/Jaspar

Match Rank:3
Score:0.83
Offset:-3
Orientation:forward strand
Alignment:---TAMTTTCAWTTTC-----
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T C T G A G T A C A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

IRF7/MA0772.1/Jaspar

Match Rank:4
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TAMTTTCAWTTTC--
-ANTTTCGCTTTCGN
 A C G T C T G A G T A C A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A C G T A C G T
A C G T C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:5
Score:0.81
Offset:1
Orientation:forward strand
Alignment:TAMTTTCAWTTTC
-AGTTTCAKTTTC
 A C G T C T G A G T A C A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C
A C G T C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:6
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TAMTTTCAWTTTC-
TCAGTTTCATTTTCC
 A C G T A C G T C T G A G T A C A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A C G T
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TAMTTTCAWTTTC
-ASTTTCASTTYC
 A C G T C T G A G T A C A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C
A C G T C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TAMTTTCAWTTTC
-RSTTTCRSTTTC
 A C G T C T G A G T A C A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C
A C G T T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-TAMTTTCAWTTTC-
TCACTTTCACTTTCN
 A C G T A C G T C T G A G T A C A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.78
Offset:1
Orientation:forward strand
Alignment:TAMTTTCAWTTTC
-ACTTTCACTTTC
 A C G T C T G A G T A C A C G T A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A G T C
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C