Information for 17-TGCCHGCGTTTTC (Motif 36)

A C G T A C T G A T G C A G T C G A C T C T A G A G T C A C T G A G C T A C G T A G C T A C G T A G T C
Reverse Opposite:
A C T G T C G A C T G A C G T A C T G A A G T C A C T G A G T C C G T A A C T G A T C G A G T C C G T A
p-value:1e-9
log p-value:-2.166e+01
Information Content per bp:1.845
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets42.3 +/- 21.4bp
Average Position of motif in Background27.3 +/- 31.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TGCCHGCGTTTTC
ATGCCAACC-----
 A C G T A C G T A C T G A T G C A G T C G A C T C T A G A G T C A C T G A G C T A C G T A G C T A C G T A G T C
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCCHGCGTTTTC
ATGCCCACC-----
 A C G T A C G T A C T G A T G C A G T C G A C T C T A G A G T C A C T G A G C T A C G T A G C T A C G T A G T C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:3
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGCCHGCGTTTTC--
TGCCTGCGYCMCCTT
 A C G T A C T G A T G C A G T C G A C T C T A G A G T C A C T G A G C T A C G T A G C T A C G T A G T C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCCHGCGTTTTC
TTGCCAAG------
 A C G T A C G T A C T G A T G C A G T C G A C T C T A G A G T C A C T G A G C T A C G T A G C T A C G T A G T C
A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----TGCCHGCGTTTTC
ACTATGCCAACCTACC-
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C G A C T C T A G A G T C A C T G A G C T A C G T A G C T A C G T A G T C
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C A C G T

IRF2/MA0051.1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TGCCHGCGTTTTC-
GTTTTGCTTTCACTTTCC
 A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G T C G A C T C T A G A G T C A C T G A G C T A C G T A G C T A C G T A G T C A C G T
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:TGCCHGCGTTTTC---
------TGGTTTCAGT
 A C G T A C T G A T G C A G T C G A C T C T A G A G T C A C T G A G C T A C G T A G C T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:8
Score:0.50
Offset:8
Orientation:forward strand
Alignment:TGCCHGCGTTTTC--
--------TTTTCCA
 A C G T A C T G A T G C A G T C G A C T C T A G A G T C A C T G A G C T A C G T A G C T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--TGCCHGCGTTTTC
CGTGCCAAG------
 A C G T A C G T A C G T A C T G A T G C A G T C G A C T C T A G A G T C A C T G A G C T A C G T A G C T A C G T A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0127.1_Gata6_2/Jaspar

Match Rank:10
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:TGCCHGCGTTTTC-----
-NGCTGCGATATCGNCGC
 A C G T A C T G A T G C A G T C G A C T C T A G A G T C A C T G A G C T A C G T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T A G T A G C A C G T T A C G G T A C C A T G T G C A C A G T G T C A A C G T G T A C C A T G A G T C T A G C T A C G G T A C