Information for 14-CAAAAGCAAAWAAAWG (Motif 27)

G A T C C T G A T C G A C G T A C T G A A T C G T G A C G T C A C G T A C G T A C G A T C T G A C T G A C T G A C G A T C T A G
Reverse Opposite:
A G T C C G T A A G C T A G C T A G C T C G T A A C G T A C G T A C G T A C T G A T G C A G C T A C G T A G C T A G C T C A T G
p-value:1e-10
log p-value:-2.448e+01
Information Content per bp:1.696
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 22.3bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXP1/MA0481.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CAAAAGCAAAWAAAWG
CAAAAGTAAACAAAG-
 G A T C C T G A T C G A C G T A C T G A A T C G T G A C G T C A C G T A C G T A C G A T C T G A C T G A C T G A C G A T C T A G
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:forward strand
Alignment:CAAAAGCAAAWAAAWG--
--AGAGCCATAAAATTCG
 G A T C C T G A T C G A C G T A C T G A A T C G T G A C G T C A C G T A C G T A C G A T C T G A C T G A C T G A C G A T C T A G A C G T A C G T
A C G T A C G T T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

PB0015.1_Foxa2_1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CAAAAGCAAAWAAAWG-
AAAAAGTAAACAAAGAC
 G A T C C T G A T C G A C G T A C T G A A T C G T G A C G T C A C G T A C G T A C G A T C T G A C T G A C T G A C G A T C T A G A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

PH0108.1_Msx3/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CAAAAGCAAAWAAAWG
CAAAACCAATTAATTT
 G A T C C T G A T C G A C G T A C T G A A T C G T G A C G T C A C G T A C G T A C G A T C T G A C T G A C T G A C G A T C T A G
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T

Hoxd9/MA0913.1/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:forward strand
Alignment:CAAAAGCAAAWAAAWG
-----GCAATAAAAA-
 G A T C C T G A T C G A C G T A C T G A A T C G T G A C G T C A C G T A C G T A C G A T C T G A C T G A C T G A C G A T C T A G
A C G T A C G T A C G T A C G T A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CAAAAGCAAAWAAAWG
AAAAACCAATTAAGAA
 G A T C C T G A T C G A C G T A C T G A A T C G T G A C G T C A C G T A C G T A C G A T C T G A C T G A C T G A C G A T C T A G
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

Hmx2/MA0897.1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAAAAGCAAAWAAAWG--
-ACAAGCAATTAAAGAAT
 G A T C C T G A T C G A C G T A C T G A A T C G T G A C G T C A C G T A C G T A C G A T C T G A C T G A C T G A C G A T C T A G A C G T A C G T
A C G T T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAAAAGCAAAWAAAWG--
-ACAAGCAATTAAAGAAT
 G A T C C T G A T C G A C G T A C T G A A T C G T G A C G T C A C G T A C G T A C G A T C T G A C T G A C T G A C G A T C T A G A C G T A C G T
A C G T T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

Hmx3/MA0898.1/Jaspar

Match Rank:9
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAAAAGCAAAWAAAWG--
-ACAAGCAATTAAAGAAT
 G A T C C T G A T C G A C G T A C T G A A T C G T G A C G T C A C G T A C G T A C G A T C T G A C T G A C T G A C G A T C T A G A C G T A C G T
A C G T T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:CAAAAGCAAAWAAAWG--
-ACAAGCAATTAAAGAAT
 G A T C C T G A T C G A C G T A C T G A A T C G T G A C G T C A C G T A C G T A C G A T C T G A C T G A C T G A C G A T C T A G A C G T A C G T
A C G T T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T