Information for 14-CAGCGRTCAAGGG (Motif 24)

A T G C G T C A A C T G T G A C T C A G C T A G A C G T A G T C C T G A C T G A A C T G C A T G A C T G
Reverse Opposite:
A G T C G T A C A G T C G A C T A G C T A C T G G T C A A G T C A G T C A C T G A G T C A C G T A T C G
p-value:1e-11
log p-value:-2.624e+01
Information Content per bp:1.763
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif32.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets51.2 +/- 21.9bp
Average Position of motif in Background40.4 +/- 31.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CAGCGRTCAAGGG
CAAAGGTCAAGGG
 A T G C G T C A A C T G T G A C T C A G C T A G A C G T A G T C C T G A C T G A A C T G C A T G A C T G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CAGCGRTCAAGGG-
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A T G C G T C A A C T G T G A C T C A G C T A G A C G T A G T C C T G A C T G A A C T G C A T G A C T G A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:CAGCGRTCAAGGG--
---AGGTCAAGGTCA
 A T G C G T C A A C T G T G A C T C A G C T A G A C G T A G T C C T G A C T G A A C T G C A T G A C T G A C G T A C G T
A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Mitf/MA0620.1/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CAGCGRTCAAGGG-
----GGTCACGTGG
 A T G C G T C A A C T G T G A C T C A G C T A G A C G T A G T C C T G A C T G A A C T G C A T G A C T G A C G T
A C G T A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CAGCGRTCAAGGG--
---AGGTCAAGGTCA
 A T G C G T C A A C T G T G A C T C A G C T A G A C G T A G T C C T G A C T G A A C T G C A T G A C T G A C G T A C G T
A C G T A C G T A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A

PB0030.1_Hnf4a_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CAGCGRTCAAGGG-
CTCCAGGGGTCAATTGA
 A C G T A C G T A C G T A T G C G T C A A C T G T G A C T C A G C T A G A C G T A G T C C T G A C T G A A C T G C A T G A C T G A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

PB0057.1_Rxra_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CAGCGRTCAAGGG-
NTNNNGGGGTCANGNNN
 A C G T A C G T A C G T A T G C G T C A A C T G T G A C T C A G C T A G A C G T A G T C C T G A C T G A A C T G C A T G A C T G A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGCGRTCAAGGG
-AGRGGTCA----
 A T G C G T C A A C T G T G A C T C A G C T A G A C G T A G T C C T G A C T G A A C T G C A T G A C T G
A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGCGRTCAAGGG---
-AGGGGTCAGAGGTCA
 A T G C G T C A A C T G T G A C T C A G C T A G A C G T A G T C C T G A C T G A A C T G C A T G A C T G A C G T A C G T A C G T
A C G T T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

E-box(bHLH)/Promoter/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CAGCGRTCAAGGG-
--CCGGTCACGTGA
 A T G C G T C A A C T G T G A C T C A G C T A G A C G T A G T C C T G A C T G A A C T G C A T G A C T G A C G T
A C G T A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A