Information for 12-CGGMCCTGAGAGK (Motif 22)

A G T C A C T G A T C G G T C A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C T G A C G T
Reverse Opposite:
G T C A A G T C G A C T A G T C A C G T G T A C C G T A C T A G A C T G A C G T A T G C A G T C A C T G
p-value:1e-12
log p-value:-2.787e+01
Information Content per bp:1.846
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.90%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 21.2bp
Average Position of motif in Background46.1 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CGGMCCTGAGAGK--
----CTTGAGTGGCT
 A G T C A C T G A T C G G T C A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CGGMCCTGAGAGK--
-----TTGAGTGSTT
 A G T C A C T G A T C G G T C A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:3
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CGGMCCTGAGAGK-
----CTYRAGTGSY
 A G T C A C T G A T C G G T C A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGGMCCTGAGAGK-
----BTBRAGTGSN
 A G T C A C T G A T C G G T C A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGGMCCTGAGAGK
TGACCTTGAN---
 A G T C A C T G A T C G G T C A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C T G A C G T
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CGGMCCTGAGAGK
ATGCCCTGAGGC-
 A G T C A C T G A T C G G T C A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C T G A C G T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CGGMCCTGAGAGK
WTGSCCTSAGGS-
 A G T C A C T G A T C G G T C A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C T G A C G T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CGGMCCTGAGAGK
CCTCACCTG-----
 A C G T A G T C A C T G A T C G G T C A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C T G A C G T
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CGGMCCTGAGAGK--
-----TTRAGTGSYK
 A G T C A C T G A T C G G T C A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGGMCCTGAGAGK-
-TGCCCTNAGGGCA
 A G T C A C T G A T C G G T C A A G T C A G T C A C G T A C T G C G T A A C T G C G T A A C T G A C G T A C G T
A C G T G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A